Gene : Lsat_1_v5_gn_6_60341 L. sativa V8
Defline:  (1 of 10) PTHR10891:SF574 - CALCIUM-BINDING PROTEIN CML30-RELATED Genomic Order:  1799
Name:  ? Lsat_1_v5_gn_6_60341 Secondary Identifier:  ? PAC:38938629
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_60341 0.5kb upstream 0.5kb upstream 3345   true Lsat_1_v8_lg_6: 86599208-86602552 Lactuca sativa
Lsat_1_v5_gn_6_60341 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 86599208-86599707 Lactuca sativa
Lsat_1_v5_gn_6_60341 0.5kb downstream 0.5kb downstream 3345   true Lsat_1_v8_lg_6: 86599708-86603052 Lactuca sativa
Lsat_1_v5_gn_6_60341 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 86602553-86603052 Lactuca sativa
Lsat_1_v5_gn_6_60341 1.0kb upstream 1.0kb upstream 3845   true Lsat_1_v8_lg_6: 86598708-86602552 Lactuca sativa
Lsat_1_v5_gn_6_60341 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 86598708-86599707 Lactuca sativa
Lsat_1_v5_gn_6_60341 1.0kb downstream 1.0kb downstream 3845   true Lsat_1_v8_lg_6: 86599708-86603552 Lactuca sativa
Lsat_1_v5_gn_6_60341 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 86602553-86603552 Lactuca sativa
Lsat_1_v5_gn_6_60341 2.0kb upstream 2.0kb upstream 4845   true Lsat_1_v8_lg_6: 86597708-86602552 Lactuca sativa
Lsat_1_v5_gn_6_60341 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 86597708-86599707 Lactuca sativa
Lsat_1_v5_gn_6_60341 2.0kb downstream 2.0kb downstream 4845   true Lsat_1_v8_lg_6: 86599708-86604552 Lactuca sativa
Lsat_1_v5_gn_6_60341 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 86602553-86604552 Lactuca sativa
Lsat_1_v5_gn_6_60341 5.0kb upstream 5.0kb upstream 7845   true Lsat_1_v8_lg_6: 86594708-86602552 Lactuca sativa
Lsat_1_v5_gn_6_60341 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 86594708-86599707 Lactuca sativa
Lsat_1_v5_gn_6_60341 5.0kb downstream 5.0kb downstream 7845   true Lsat_1_v8_lg_6: 86599708-86607552 Lactuca sativa
Lsat_1_v5_gn_6_60341 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 86602553-86607552 Lactuca sativa
Lsat_1_v5_gn_6_60341 10.0kb upstream 10.0kb upstream 12845   true Lsat_1_v8_lg_6: 86589708-86602552 Lactuca sativa
Lsat_1_v5_gn_6_60341 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 86589708-86599707 Lactuca sativa
Lsat_1_v5_gn_6_60341 10.0kb downstream 10.0kb downstream 12845   true Lsat_1_v8_lg_6: 86599708-86612552 Lactuca sativa
Lsat_1_v5_gn_6_60341 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 86602553-86612552 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026671 5273 Angiosperm View MSA
121469341 5263 Asterids View MSA
123745725 5271 Pentapetalae View MSA
122794659 5272 Eudicot View MSA
121296467 5274 Embryophyte View MSA
123425898 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain