Gene : Lsat_1_v5_gn_6_6141 L. sativa V8
Defline:  (1 of 12) PTHR11260:SF220 - GST-CONTAINING FLYWCH ZINC-FINGER PROTEIN Genomic Order:  170
Name:  ? Lsat_1_v5_gn_6_6141 Secondary Identifier:  ? PAC:38936674
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6842 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_6141 0.5kb upstream 0.5kb upstream 2265   true Lsat_1_v8_lg_6: 9284105-9286369 Lactuca sativa
Lsat_1_v5_gn_6_6141 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 9284105-9284604 Lactuca sativa
Lsat_1_v5_gn_6_6141 0.5kb downstream 0.5kb downstream 2265   true Lsat_1_v8_lg_6: 9284605-9286869 Lactuca sativa
Lsat_1_v5_gn_6_6141 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 9286370-9286869 Lactuca sativa
Lsat_1_v5_gn_6_6141 1.0kb upstream 1.0kb upstream 2765   true Lsat_1_v8_lg_6: 9283605-9286369 Lactuca sativa
Lsat_1_v5_gn_6_6141 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 9283605-9284604 Lactuca sativa
Lsat_1_v5_gn_6_6141 1.0kb downstream 1.0kb downstream 2765   true Lsat_1_v8_lg_6: 9284605-9287369 Lactuca sativa
Lsat_1_v5_gn_6_6141 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 9286370-9287369 Lactuca sativa
Lsat_1_v5_gn_6_6141 2.0kb upstream 2.0kb upstream 3765   true Lsat_1_v8_lg_6: 9282605-9286369 Lactuca sativa
Lsat_1_v5_gn_6_6141 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 9282605-9284604 Lactuca sativa
Lsat_1_v5_gn_6_6141 2.0kb downstream 2.0kb downstream 3765   true Lsat_1_v8_lg_6: 9284605-9288369 Lactuca sativa
Lsat_1_v5_gn_6_6141 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 9286370-9288369 Lactuca sativa
Lsat_1_v5_gn_6_6141 5.0kb upstream 5.0kb upstream 6765   true Lsat_1_v8_lg_6: 9279605-9286369 Lactuca sativa
Lsat_1_v5_gn_6_6141 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 9279605-9284604 Lactuca sativa
Lsat_1_v5_gn_6_6141 5.0kb downstream 5.0kb downstream 6765   true Lsat_1_v8_lg_6: 9284605-9291369 Lactuca sativa
Lsat_1_v5_gn_6_6141 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 9286370-9291369 Lactuca sativa
Lsat_1_v5_gn_6_6141 10.0kb upstream 10.0kb upstream 11765   true Lsat_1_v8_lg_6: 9274605-9286369 Lactuca sativa
Lsat_1_v5_gn_6_6141 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 9274605-9284604 Lactuca sativa
Lsat_1_v5_gn_6_6141 10.0kb downstream 10.0kb downstream 11765   true Lsat_1_v8_lg_6: 9284605-9296369 Lactuca sativa
Lsat_1_v5_gn_6_6141 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 9286370-9296369 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040873 5273 Angiosperm View MSA
121472153 5263 Asterids View MSA
123751759 5271 Pentapetalae View MSA
122789366 5272 Eudicot View MSA
121350998 5274 Embryophyte View MSA
123428193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain