Gene : Lsat_1_v5_gn_6_63921 L. sativa V8
Defline:  (1 of 2) PTHR31791:SF10 - FRIGIDA-LIKE PROTEIN 1-RELATED Genomic Order:  1944
Name:  ? Lsat_1_v5_gn_6_63921 Secondary Identifier:  ? PAC:38938241
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_63921 0.5kb upstream 0.5kb upstream 3041   true Lsat_1_v8_lg_6: 100894559-100897599 Lactuca sativa
Lsat_1_v5_gn_6_63921 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 100897100-100897599 Lactuca sativa
Lsat_1_v5_gn_6_63921 0.5kb downstream 0.5kb downstream 3041   true Lsat_1_v8_lg_6: 100894059-100897099 Lactuca sativa
Lsat_1_v5_gn_6_63921 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 100894059-100894558 Lactuca sativa
Lsat_1_v5_gn_6_63921 1.0kb upstream 1.0kb upstream 3541   true Lsat_1_v8_lg_6: 100894559-100898099 Lactuca sativa
Lsat_1_v5_gn_6_63921 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 100897100-100898099 Lactuca sativa
Lsat_1_v5_gn_6_63921 1.0kb downstream 1.0kb downstream 3541   true Lsat_1_v8_lg_6: 100893559-100897099 Lactuca sativa
Lsat_1_v5_gn_6_63921 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 100893559-100894558 Lactuca sativa
Lsat_1_v5_gn_6_63921 2.0kb upstream 2.0kb upstream 4541   true Lsat_1_v8_lg_6: 100894559-100899099 Lactuca sativa
Lsat_1_v5_gn_6_63921 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 100897100-100899099 Lactuca sativa
Lsat_1_v5_gn_6_63921 2.0kb downstream 2.0kb downstream 4541   true Lsat_1_v8_lg_6: 100892559-100897099 Lactuca sativa
Lsat_1_v5_gn_6_63921 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 100892559-100894558 Lactuca sativa
Lsat_1_v5_gn_6_63921 5.0kb upstream 5.0kb upstream 7541   true Lsat_1_v8_lg_6: 100894559-100902099 Lactuca sativa
Lsat_1_v5_gn_6_63921 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 100897100-100902099 Lactuca sativa
Lsat_1_v5_gn_6_63921 5.0kb downstream 5.0kb downstream 7541   true Lsat_1_v8_lg_6: 100889559-100897099 Lactuca sativa
Lsat_1_v5_gn_6_63921 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 100889559-100894558 Lactuca sativa
Lsat_1_v5_gn_6_63921 10.0kb upstream 10.0kb upstream 12541   true Lsat_1_v8_lg_6: 100894559-100907099 Lactuca sativa
Lsat_1_v5_gn_6_63921 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 100897100-100907099 Lactuca sativa
Lsat_1_v5_gn_6_63921 10.0kb downstream 10.0kb downstream 12541   true Lsat_1_v8_lg_6: 100884559-100897099 Lactuca sativa
Lsat_1_v5_gn_6_63921 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 100884559-100894558 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121464253 5263 Asterids View MSA
123742663 5271 Pentapetalae View MSA
122794855 5272 Eudicot View MSA
122049727 5273 Angiosperm View MSA
121311561 5274 Embryophyte View MSA
123348841 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain