Gene : Lsat_1_v5_gn_6_63800 L. sativa V8
Defline:  (1 of 1) PTHR10896//PTHR10896:SF27 - GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  1940
Name:  ? Lsat_1_v5_gn_6_63800 Secondary Identifier:  ? PAC:38939269
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5800 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_63800 0.5kb upstream 0.5kb upstream 3779   true Lsat_1_v8_lg_6: 100658904-100662682 Lactuca sativa
Lsat_1_v5_gn_6_63800 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 100658904-100659403 Lactuca sativa
Lsat_1_v5_gn_6_63800 0.5kb downstream 0.5kb downstream 3779   true Lsat_1_v8_lg_6: 100659404-100663182 Lactuca sativa
Lsat_1_v5_gn_6_63800 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 100662683-100663182 Lactuca sativa
Lsat_1_v5_gn_6_63800 1.0kb upstream 1.0kb upstream 4279   true Lsat_1_v8_lg_6: 100658404-100662682 Lactuca sativa
Lsat_1_v5_gn_6_63800 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 100658404-100659403 Lactuca sativa
Lsat_1_v5_gn_6_63800 1.0kb downstream 1.0kb downstream 4279   true Lsat_1_v8_lg_6: 100659404-100663682 Lactuca sativa
Lsat_1_v5_gn_6_63800 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 100662683-100663682 Lactuca sativa
Lsat_1_v5_gn_6_63800 2.0kb upstream 2.0kb upstream 5279   true Lsat_1_v8_lg_6: 100657404-100662682 Lactuca sativa
Lsat_1_v5_gn_6_63800 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 100657404-100659403 Lactuca sativa
Lsat_1_v5_gn_6_63800 2.0kb downstream 2.0kb downstream 5279   true Lsat_1_v8_lg_6: 100659404-100664682 Lactuca sativa
Lsat_1_v5_gn_6_63800 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 100662683-100664682 Lactuca sativa
Lsat_1_v5_gn_6_63800 5.0kb upstream 5.0kb upstream 8279   true Lsat_1_v8_lg_6: 100654404-100662682 Lactuca sativa
Lsat_1_v5_gn_6_63800 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 100654404-100659403 Lactuca sativa
Lsat_1_v5_gn_6_63800 5.0kb downstream 5.0kb downstream 8279   true Lsat_1_v8_lg_6: 100659404-100667682 Lactuca sativa
Lsat_1_v5_gn_6_63800 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 100662683-100667682 Lactuca sativa
Lsat_1_v5_gn_6_63800 10.0kb upstream 10.0kb upstream 13279   true Lsat_1_v8_lg_6: 100649404-100662682 Lactuca sativa
Lsat_1_v5_gn_6_63800 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 100649404-100659403 Lactuca sativa
Lsat_1_v5_gn_6_63800 10.0kb downstream 10.0kb downstream 13279   true Lsat_1_v8_lg_6: 100659404-100672682 Lactuca sativa
Lsat_1_v5_gn_6_63800 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 100662683-100672682 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475318 5263 Asterids View MSA
123748669 5271 Pentapetalae View MSA
122794067 5272 Eudicot View MSA
122050395 5273 Angiosperm View MSA
121346281 5274 Embryophyte View MSA
123380360 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain