Gene : Lsat_1_v5_gn_6_64460 L. sativa V8
Defline:  (1 of 1) K01438 - acetylornithine deacetylase (argE) Genomic Order:  1927
Name:  ? Lsat_1_v5_gn_6_64460 Secondary Identifier:  ? PAC:38941094
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ARGSYN-PWY Lactuca sativa pathologic  
Lsativa GLUTORN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_64460 0.5kb upstream 0.5kb upstream 4987   true Lsat_1_v8_lg_6: 98741835-98746821 Lactuca sativa
Lsat_1_v5_gn_6_64460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 98741835-98742334 Lactuca sativa
Lsat_1_v5_gn_6_64460 0.5kb downstream 0.5kb downstream 4987   true Lsat_1_v8_lg_6: 98742335-98747321 Lactuca sativa
Lsat_1_v5_gn_6_64460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 98746822-98747321 Lactuca sativa
Lsat_1_v5_gn_6_64460 1.0kb upstream 1.0kb upstream 5487   true Lsat_1_v8_lg_6: 98741335-98746821 Lactuca sativa
Lsat_1_v5_gn_6_64460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 98741335-98742334 Lactuca sativa
Lsat_1_v5_gn_6_64460 1.0kb downstream 1.0kb downstream 5487   true Lsat_1_v8_lg_6: 98742335-98747821 Lactuca sativa
Lsat_1_v5_gn_6_64460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 98746822-98747821 Lactuca sativa
Lsat_1_v5_gn_6_64460 2.0kb upstream 2.0kb upstream 6487   true Lsat_1_v8_lg_6: 98740335-98746821 Lactuca sativa
Lsat_1_v5_gn_6_64460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 98740335-98742334 Lactuca sativa
Lsat_1_v5_gn_6_64460 2.0kb downstream 2.0kb downstream 6487   true Lsat_1_v8_lg_6: 98742335-98748821 Lactuca sativa
Lsat_1_v5_gn_6_64460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 98746822-98748821 Lactuca sativa
Lsat_1_v5_gn_6_64460 5.0kb upstream 5.0kb upstream 9487   true Lsat_1_v8_lg_6: 98737335-98746821 Lactuca sativa
Lsat_1_v5_gn_6_64460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 98737335-98742334 Lactuca sativa
Lsat_1_v5_gn_6_64460 5.0kb downstream 5.0kb downstream 9487   true Lsat_1_v8_lg_6: 98742335-98751821 Lactuca sativa
Lsat_1_v5_gn_6_64460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 98746822-98751821 Lactuca sativa
Lsat_1_v5_gn_6_64460 10.0kb upstream 10.0kb upstream 14487   true Lsat_1_v8_lg_6: 98732335-98746821 Lactuca sativa
Lsat_1_v5_gn_6_64460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 98732335-98742334 Lactuca sativa
Lsat_1_v5_gn_6_64460 10.0kb downstream 10.0kb downstream 14487   true Lsat_1_v8_lg_6: 98742335-98756821 Lactuca sativa
Lsat_1_v5_gn_6_64460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 98746822-98756821 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469836 5263 Asterids View MSA
123738237 5271 Pentapetalae View MSA
122790334 5272 Eudicot View MSA
122044666 5273 Angiosperm View MSA
121348165 5274 Embryophyte View MSA
123425283 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain