Gene : Lsat_1_v5_gn_6_65481 L. sativa V8
Defline:  (1 of 65) PF00612 - IQ calmodulin-binding motif (IQ) Genomic Order:  1904
Name:  ? Lsat_1_v5_gn_6_65481 Secondary Identifier:  ? PAC:38940375
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_65481 0.5kb upstream 0.5kb upstream 4652   true Lsat_1_v8_lg_6: 96128406-96133057 Lactuca sativa
Lsat_1_v5_gn_6_65481 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 96128406-96128905 Lactuca sativa
Lsat_1_v5_gn_6_65481 0.5kb downstream 0.5kb downstream 4652   true Lsat_1_v8_lg_6: 96128906-96133557 Lactuca sativa
Lsat_1_v5_gn_6_65481 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 96133058-96133557 Lactuca sativa
Lsat_1_v5_gn_6_65481 1.0kb upstream 1.0kb upstream 5152   true Lsat_1_v8_lg_6: 96127906-96133057 Lactuca sativa
Lsat_1_v5_gn_6_65481 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 96127906-96128905 Lactuca sativa
Lsat_1_v5_gn_6_65481 1.0kb downstream 1.0kb downstream 5152   true Lsat_1_v8_lg_6: 96128906-96134057 Lactuca sativa
Lsat_1_v5_gn_6_65481 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 96133058-96134057 Lactuca sativa
Lsat_1_v5_gn_6_65481 2.0kb upstream 2.0kb upstream 6152   true Lsat_1_v8_lg_6: 96126906-96133057 Lactuca sativa
Lsat_1_v5_gn_6_65481 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 96126906-96128905 Lactuca sativa
Lsat_1_v5_gn_6_65481 2.0kb downstream 2.0kb downstream 6152   true Lsat_1_v8_lg_6: 96128906-96135057 Lactuca sativa
Lsat_1_v5_gn_6_65481 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 96133058-96135057 Lactuca sativa
Lsat_1_v5_gn_6_65481 5.0kb upstream 5.0kb upstream 9152   true Lsat_1_v8_lg_6: 96123906-96133057 Lactuca sativa
Lsat_1_v5_gn_6_65481 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 96123906-96128905 Lactuca sativa
Lsat_1_v5_gn_6_65481 5.0kb downstream 5.0kb downstream 9152   true Lsat_1_v8_lg_6: 96128906-96138057 Lactuca sativa
Lsat_1_v5_gn_6_65481 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 96133058-96138057 Lactuca sativa
Lsat_1_v5_gn_6_65481 10.0kb upstream 10.0kb upstream 14152   true Lsat_1_v8_lg_6: 96118906-96133057 Lactuca sativa
Lsat_1_v5_gn_6_65481 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 96118906-96128905 Lactuca sativa
Lsat_1_v5_gn_6_65481 10.0kb downstream 10.0kb downstream 14152   true Lsat_1_v8_lg_6: 96128906-96143057 Lactuca sativa
Lsat_1_v5_gn_6_65481 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 96133058-96143057 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466873 5263 Asterids View MSA
123736722 5271 Pentapetalae View MSA
122789560 5272 Eudicot View MSA
122050586 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain