Gene : Lsat_1_v5_gn_6_65981 L. sativa V8
Defline:  (1 of 4) PTHR24093//PTHR24093:SF264 - FAMILY NOT NAMED // ATPASE 4, PLASMA MEMBRANE-TYPE Genomic Order:  2011
Name:  ? Lsat_1_v5_gn_6_65981 Secondary Identifier:  ? PAC:38937510
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_65981 0.5kb upstream 0.5kb upstream 8364   true Lsat_1_v8_lg_6: 109738037-109746400 Lactuca sativa
Lsat_1_v5_gn_6_65981 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 109738037-109738536 Lactuca sativa
Lsat_1_v5_gn_6_65981 0.5kb downstream 0.5kb downstream 8364   true Lsat_1_v8_lg_6: 109738537-109746900 Lactuca sativa
Lsat_1_v5_gn_6_65981 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 109746401-109746900 Lactuca sativa
Lsat_1_v5_gn_6_65981 1.0kb upstream 1.0kb upstream 8864   true Lsat_1_v8_lg_6: 109737537-109746400 Lactuca sativa
Lsat_1_v5_gn_6_65981 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 109737537-109738536 Lactuca sativa
Lsat_1_v5_gn_6_65981 1.0kb downstream 1.0kb downstream 8864   true Lsat_1_v8_lg_6: 109738537-109747400 Lactuca sativa
Lsat_1_v5_gn_6_65981 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 109746401-109747400 Lactuca sativa
Lsat_1_v5_gn_6_65981 2.0kb upstream 2.0kb upstream 9864   true Lsat_1_v8_lg_6: 109736537-109746400 Lactuca sativa
Lsat_1_v5_gn_6_65981 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 109736537-109738536 Lactuca sativa
Lsat_1_v5_gn_6_65981 2.0kb downstream 2.0kb downstream 9864   true Lsat_1_v8_lg_6: 109738537-109748400 Lactuca sativa
Lsat_1_v5_gn_6_65981 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 109746401-109748400 Lactuca sativa
Lsat_1_v5_gn_6_65981 5.0kb upstream 5.0kb upstream 12864   true Lsat_1_v8_lg_6: 109733537-109746400 Lactuca sativa
Lsat_1_v5_gn_6_65981 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 109733537-109738536 Lactuca sativa
Lsat_1_v5_gn_6_65981 5.0kb downstream 5.0kb downstream 12864   true Lsat_1_v8_lg_6: 109738537-109751400 Lactuca sativa
Lsat_1_v5_gn_6_65981 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 109746401-109751400 Lactuca sativa
Lsat_1_v5_gn_6_65981 10.0kb upstream 10.0kb upstream 17864   true Lsat_1_v8_lg_6: 109728537-109746400 Lactuca sativa
Lsat_1_v5_gn_6_65981 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 109728537-109738536 Lactuca sativa
Lsat_1_v5_gn_6_65981 10.0kb downstream 10.0kb downstream 17864   true Lsat_1_v8_lg_6: 109738537-109756400 Lactuca sativa
Lsat_1_v5_gn_6_65981 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 109746401-109756400 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476492 5263 Asterids View MSA
123745200 5271 Pentapetalae View MSA
122795263 5272 Eudicot View MSA
122049671 5273 Angiosperm View MSA
121311532 5274 Embryophyte View MSA
123428375 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain