Gene : Lsat_1_v5_gn_6_6520 L. sativa V8
Defline:  (1 of 8) PF12043 - Domain of unknown function (DUF3527) (DUF3527) Genomic Order:  153
Name:  ? Lsat_1_v5_gn_6_6520 Secondary Identifier:  ? PAC:38939215
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_6520 0.5kb upstream 0.5kb upstream 3491   true Lsat_1_v8_lg_6: 9078655-9082145 Lactuca sativa
Lsat_1_v5_gn_6_6520 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 9081646-9082145 Lactuca sativa
Lsat_1_v5_gn_6_6520 0.5kb downstream 0.5kb downstream 3491   true Lsat_1_v8_lg_6: 9078155-9081645 Lactuca sativa
Lsat_1_v5_gn_6_6520 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 9078155-9078654 Lactuca sativa
Lsat_1_v5_gn_6_6520 1.0kb upstream 1.0kb upstream 3991   true Lsat_1_v8_lg_6: 9078655-9082645 Lactuca sativa
Lsat_1_v5_gn_6_6520 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 9081646-9082645 Lactuca sativa
Lsat_1_v5_gn_6_6520 1.0kb downstream 1.0kb downstream 3991   true Lsat_1_v8_lg_6: 9077655-9081645 Lactuca sativa
Lsat_1_v5_gn_6_6520 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 9077655-9078654 Lactuca sativa
Lsat_1_v5_gn_6_6520 2.0kb upstream 2.0kb upstream 4991   true Lsat_1_v8_lg_6: 9078655-9083645 Lactuca sativa
Lsat_1_v5_gn_6_6520 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 9081646-9083645 Lactuca sativa
Lsat_1_v5_gn_6_6520 2.0kb downstream 2.0kb downstream 4991   true Lsat_1_v8_lg_6: 9076655-9081645 Lactuca sativa
Lsat_1_v5_gn_6_6520 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 9076655-9078654 Lactuca sativa
Lsat_1_v5_gn_6_6520 5.0kb upstream 5.0kb upstream 7991   true Lsat_1_v8_lg_6: 9078655-9086645 Lactuca sativa
Lsat_1_v5_gn_6_6520 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 9081646-9086645 Lactuca sativa
Lsat_1_v5_gn_6_6520 5.0kb downstream 5.0kb downstream 7991   true Lsat_1_v8_lg_6: 9073655-9081645 Lactuca sativa
Lsat_1_v5_gn_6_6520 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 9073655-9078654 Lactuca sativa
Lsat_1_v5_gn_6_6520 10.0kb upstream 10.0kb upstream 12991   true Lsat_1_v8_lg_6: 9078655-9091645 Lactuca sativa
Lsat_1_v5_gn_6_6520 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 9081646-9091645 Lactuca sativa
Lsat_1_v5_gn_6_6520 10.0kb downstream 10.0kb downstream 12991   true Lsat_1_v8_lg_6: 9068655-9081645 Lactuca sativa
Lsat_1_v5_gn_6_6520 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 9068655-9078654 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479257 5263 Asterids View MSA
123751410 5271 Pentapetalae View MSA
122793362 5272 Eudicot View MSA
122047262 5273 Angiosperm View MSA
121310717 5274 Embryophyte View MSA
123348134 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain