Gene : Lsat_1_v5_gn_6_29141 L. sativa V8
Defline:  (1 of 1) K10588 - ubiquitin-protein ligase E3 B (UBE3B) Genomic Order:  859
Name:  ? Lsat_1_v5_gn_6_29141 Secondary Identifier:  ? PAC:38937874
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7511 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_29141 0.5kb upstream 0.5kb upstream 10048   true Lsat_1_v8_lg_6: 36948885-36958932 Lactuca sativa
Lsat_1_v5_gn_6_29141 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 36958433-36958932 Lactuca sativa
Lsat_1_v5_gn_6_29141 0.5kb downstream 0.5kb downstream 10048   true Lsat_1_v8_lg_6: 36948385-36958432 Lactuca sativa
Lsat_1_v5_gn_6_29141 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 36948385-36948884 Lactuca sativa
Lsat_1_v5_gn_6_29141 1.0kb upstream 1.0kb upstream 10548   true Lsat_1_v8_lg_6: 36948885-36959432 Lactuca sativa
Lsat_1_v5_gn_6_29141 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 36958433-36959432 Lactuca sativa
Lsat_1_v5_gn_6_29141 1.0kb downstream 1.0kb downstream 10548   true Lsat_1_v8_lg_6: 36947885-36958432 Lactuca sativa
Lsat_1_v5_gn_6_29141 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 36947885-36948884 Lactuca sativa
Lsat_1_v5_gn_6_29141 2.0kb upstream 2.0kb upstream 11548   true Lsat_1_v8_lg_6: 36948885-36960432 Lactuca sativa
Lsat_1_v5_gn_6_29141 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 36958433-36960432 Lactuca sativa
Lsat_1_v5_gn_6_29141 2.0kb downstream 2.0kb downstream 11548   true Lsat_1_v8_lg_6: 36946885-36958432 Lactuca sativa
Lsat_1_v5_gn_6_29141 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 36946885-36948884 Lactuca sativa
Lsat_1_v5_gn_6_29141 5.0kb upstream 5.0kb upstream 14548   true Lsat_1_v8_lg_6: 36948885-36963432 Lactuca sativa
Lsat_1_v5_gn_6_29141 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 36958433-36963432 Lactuca sativa
Lsat_1_v5_gn_6_29141 5.0kb downstream 5.0kb downstream 14548   true Lsat_1_v8_lg_6: 36943885-36958432 Lactuca sativa
Lsat_1_v5_gn_6_29141 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 36943885-36948884 Lactuca sativa
Lsat_1_v5_gn_6_29141 10.0kb upstream 10.0kb upstream 19548   true Lsat_1_v8_lg_6: 36948885-36968432 Lactuca sativa
Lsat_1_v5_gn_6_29141 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 36958433-36968432 Lactuca sativa
Lsat_1_v5_gn_6_29141 10.0kb downstream 10.0kb downstream 19548   true Lsat_1_v8_lg_6: 36938885-36958432 Lactuca sativa
Lsat_1_v5_gn_6_29141 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 36938885-36948884 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467608 5263 Asterids View MSA
123737097 5271 Pentapetalae View MSA
122793139 5272 Eudicot View MSA
122047566 5273 Angiosperm View MSA
123429069 5275 Viridiplantae View MSA
121351552 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain