Gene : Lsat_1_v5_gn_6_30301 L. sativa V8
Defline:  (1 of 1) PF04689 - DNA binding protein S1FA (S1FA) Genomic Order:  924
Name:  ? Lsat_1_v5_gn_6_30301 Secondary Identifier:  ? PAC:38936577
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_30301 0.5kb upstream 0.5kb upstream 1617   true Lsat_1_v8_lg_6: 40652476-40654092 Lactuca sativa
Lsat_1_v5_gn_6_30301 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 40652476-40652975 Lactuca sativa
Lsat_1_v5_gn_6_30301 0.5kb downstream 0.5kb downstream 1617   true Lsat_1_v8_lg_6: 40652976-40654592 Lactuca sativa
Lsat_1_v5_gn_6_30301 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 40654093-40654592 Lactuca sativa
Lsat_1_v5_gn_6_30301 1.0kb upstream 1.0kb upstream 2117   true Lsat_1_v8_lg_6: 40651976-40654092 Lactuca sativa
Lsat_1_v5_gn_6_30301 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 40651976-40652975 Lactuca sativa
Lsat_1_v5_gn_6_30301 1.0kb downstream 1.0kb downstream 2117   true Lsat_1_v8_lg_6: 40652976-40655092 Lactuca sativa
Lsat_1_v5_gn_6_30301 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 40654093-40655092 Lactuca sativa
Lsat_1_v5_gn_6_30301 2.0kb upstream 2.0kb upstream 3117   true Lsat_1_v8_lg_6: 40650976-40654092 Lactuca sativa
Lsat_1_v5_gn_6_30301 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 40650976-40652975 Lactuca sativa
Lsat_1_v5_gn_6_30301 2.0kb downstream 2.0kb downstream 3117   true Lsat_1_v8_lg_6: 40652976-40656092 Lactuca sativa
Lsat_1_v5_gn_6_30301 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 40654093-40656092 Lactuca sativa
Lsat_1_v5_gn_6_30301 5.0kb upstream 5.0kb upstream 6117   true Lsat_1_v8_lg_6: 40647976-40654092 Lactuca sativa
Lsat_1_v5_gn_6_30301 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 40647976-40652975 Lactuca sativa
Lsat_1_v5_gn_6_30301 5.0kb downstream 5.0kb downstream 6117   true Lsat_1_v8_lg_6: 40652976-40659092 Lactuca sativa
Lsat_1_v5_gn_6_30301 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 40654093-40659092 Lactuca sativa
Lsat_1_v5_gn_6_30301 10.0kb upstream 10.0kb upstream 11117   true Lsat_1_v8_lg_6: 40642976-40654092 Lactuca sativa
Lsat_1_v5_gn_6_30301 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 40642976-40652975 Lactuca sativa
Lsat_1_v5_gn_6_30301 10.0kb downstream 10.0kb downstream 11117   true Lsat_1_v8_lg_6: 40652976-40664092 Lactuca sativa
Lsat_1_v5_gn_6_30301 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 40654093-40664092 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476022 5263 Asterids View MSA
123737757 5271 Pentapetalae View MSA
122787039 5272 Eudicot View MSA
122043521 5273 Angiosperm View MSA
121348101 5274 Embryophyte View MSA
123427366 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain