Gene : Lsat_1_v5_gn_6_31540 L. sativa V8
Defline:  (1 of 1) PTHR31412//PTHR31412:SF0 - FAMILY NOT NAMED // ZINC METALLOPROTEASE EGY1, CHLOROPLASTIC-RELATED Genomic Order:  1000
Name:  ? Lsat_1_v5_gn_6_31540 Secondary Identifier:  ? PAC:38941882
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_31540 0.5kb upstream 0.5kb upstream 3989   true Lsat_1_v8_lg_6: 44438493-44442481 Lactuca sativa
Lsat_1_v5_gn_6_31540 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 44438493-44438992 Lactuca sativa
Lsat_1_v5_gn_6_31540 0.5kb downstream 0.5kb downstream 3989   true Lsat_1_v8_lg_6: 44438993-44442981 Lactuca sativa
Lsat_1_v5_gn_6_31540 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 44442482-44442981 Lactuca sativa
Lsat_1_v5_gn_6_31540 1.0kb upstream 1.0kb upstream 4489   true Lsat_1_v8_lg_6: 44437993-44442481 Lactuca sativa
Lsat_1_v5_gn_6_31540 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 44437993-44438992 Lactuca sativa
Lsat_1_v5_gn_6_31540 1.0kb downstream 1.0kb downstream 4489   true Lsat_1_v8_lg_6: 44438993-44443481 Lactuca sativa
Lsat_1_v5_gn_6_31540 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 44442482-44443481 Lactuca sativa
Lsat_1_v5_gn_6_31540 2.0kb upstream 2.0kb upstream 5489   true Lsat_1_v8_lg_6: 44436993-44442481 Lactuca sativa
Lsat_1_v5_gn_6_31540 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 44436993-44438992 Lactuca sativa
Lsat_1_v5_gn_6_31540 2.0kb downstream 2.0kb downstream 5489   true Lsat_1_v8_lg_6: 44438993-44444481 Lactuca sativa
Lsat_1_v5_gn_6_31540 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 44442482-44444481 Lactuca sativa
Lsat_1_v5_gn_6_31540 5.0kb upstream 5.0kb upstream 8489   true Lsat_1_v8_lg_6: 44433993-44442481 Lactuca sativa
Lsat_1_v5_gn_6_31540 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 44433993-44438992 Lactuca sativa
Lsat_1_v5_gn_6_31540 5.0kb downstream 5.0kb downstream 8489   true Lsat_1_v8_lg_6: 44438993-44447481 Lactuca sativa
Lsat_1_v5_gn_6_31540 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 44442482-44447481 Lactuca sativa
Lsat_1_v5_gn_6_31540 10.0kb upstream 10.0kb upstream 13489   true Lsat_1_v8_lg_6: 44428993-44442481 Lactuca sativa
Lsat_1_v5_gn_6_31540 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 44428993-44438992 Lactuca sativa
Lsat_1_v5_gn_6_31540 10.0kb downstream 10.0kb downstream 13489   true Lsat_1_v8_lg_6: 44438993-44452481 Lactuca sativa
Lsat_1_v5_gn_6_31540 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 44442482-44452481 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468796 5263 Asterids View MSA
123737712 5271 Pentapetalae View MSA
122791466 5272 Eudicot View MSA
122047981 5273 Angiosperm View MSA
121344636 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain