Gene : Lsat_1_v5_gn_6_35741 L. sativa V8
Defline:  (1 of 9) 1.1.1.331 - Secoisolariciresinol dehydrogenase Genomic Order:  1091
Name:  ? Lsat_1_v5_gn_6_35741 Secondary Identifier:  ? PAC:38938220
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5466 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_35741 0.5kb upstream 0.5kb upstream 1531   true Lsat_1_v8_lg_6: 49078731-49080261 Lactuca sativa
Lsat_1_v5_gn_6_35741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 49078731-49079230 Lactuca sativa
Lsat_1_v5_gn_6_35741 0.5kb downstream 0.5kb downstream 1531   true Lsat_1_v8_lg_6: 49079231-49080761 Lactuca sativa
Lsat_1_v5_gn_6_35741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 49080262-49080761 Lactuca sativa
Lsat_1_v5_gn_6_35741 1.0kb upstream 1.0kb upstream 2031   true Lsat_1_v8_lg_6: 49078231-49080261 Lactuca sativa
Lsat_1_v5_gn_6_35741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 49078231-49079230 Lactuca sativa
Lsat_1_v5_gn_6_35741 1.0kb downstream 1.0kb downstream 2031   true Lsat_1_v8_lg_6: 49079231-49081261 Lactuca sativa
Lsat_1_v5_gn_6_35741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 49080262-49081261 Lactuca sativa
Lsat_1_v5_gn_6_35741 2.0kb upstream 2.0kb upstream 3031   true Lsat_1_v8_lg_6: 49077231-49080261 Lactuca sativa
Lsat_1_v5_gn_6_35741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 49077231-49079230 Lactuca sativa
Lsat_1_v5_gn_6_35741 2.0kb downstream 2.0kb downstream 3031   true Lsat_1_v8_lg_6: 49079231-49082261 Lactuca sativa
Lsat_1_v5_gn_6_35741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 49080262-49082261 Lactuca sativa
Lsat_1_v5_gn_6_35741 5.0kb upstream 5.0kb upstream 6031   true Lsat_1_v8_lg_6: 49074231-49080261 Lactuca sativa
Lsat_1_v5_gn_6_35741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 49074231-49079230 Lactuca sativa
Lsat_1_v5_gn_6_35741 5.0kb downstream 5.0kb downstream 6031   true Lsat_1_v8_lg_6: 49079231-49085261 Lactuca sativa
Lsat_1_v5_gn_6_35741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 49080262-49085261 Lactuca sativa
Lsat_1_v5_gn_6_35741 10.0kb upstream 10.0kb upstream 11031   true Lsat_1_v8_lg_6: 49069231-49080261 Lactuca sativa
Lsat_1_v5_gn_6_35741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 49069231-49079230 Lactuca sativa
Lsat_1_v5_gn_6_35741 10.0kb downstream 10.0kb downstream 11031   true Lsat_1_v8_lg_6: 49079231-49090261 Lactuca sativa
Lsat_1_v5_gn_6_35741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 49080262-49090261 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475995 5263 Asterids View MSA
123749022 5271 Pentapetalae View MSA
122797133 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain