Gene : Lsat_1_v5_gn_6_35421 L. sativa V8
Defline:  (1 of 3) PTHR31415//PTHR31415:SF2 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED Genomic Order:  1071
Name:  ? Lsat_1_v5_gn_6_35421 Secondary Identifier:  ? PAC:38941469
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_35421 0.5kb upstream 0.5kb upstream 2742   true Lsat_1_v8_lg_6: 47372306-47375047 Lactuca sativa
Lsat_1_v5_gn_6_35421 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 47372306-47372805 Lactuca sativa
Lsat_1_v5_gn_6_35421 0.5kb downstream 0.5kb downstream 2742   true Lsat_1_v8_lg_6: 47372806-47375547 Lactuca sativa
Lsat_1_v5_gn_6_35421 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 47375048-47375547 Lactuca sativa
Lsat_1_v5_gn_6_35421 1.0kb upstream 1.0kb upstream 3242   true Lsat_1_v8_lg_6: 47371806-47375047 Lactuca sativa
Lsat_1_v5_gn_6_35421 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 47371806-47372805 Lactuca sativa
Lsat_1_v5_gn_6_35421 1.0kb downstream 1.0kb downstream 3242   true Lsat_1_v8_lg_6: 47372806-47376047 Lactuca sativa
Lsat_1_v5_gn_6_35421 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 47375048-47376047 Lactuca sativa
Lsat_1_v5_gn_6_35421 2.0kb upstream 2.0kb upstream 4242   true Lsat_1_v8_lg_6: 47370806-47375047 Lactuca sativa
Lsat_1_v5_gn_6_35421 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 47370806-47372805 Lactuca sativa
Lsat_1_v5_gn_6_35421 2.0kb downstream 2.0kb downstream 4242   true Lsat_1_v8_lg_6: 47372806-47377047 Lactuca sativa
Lsat_1_v5_gn_6_35421 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 47375048-47377047 Lactuca sativa
Lsat_1_v5_gn_6_35421 5.0kb upstream 5.0kb upstream 7242   true Lsat_1_v8_lg_6: 47367806-47375047 Lactuca sativa
Lsat_1_v5_gn_6_35421 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 47367806-47372805 Lactuca sativa
Lsat_1_v5_gn_6_35421 5.0kb downstream 5.0kb downstream 7242   true Lsat_1_v8_lg_6: 47372806-47380047 Lactuca sativa
Lsat_1_v5_gn_6_35421 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 47375048-47380047 Lactuca sativa
Lsat_1_v5_gn_6_35421 10.0kb upstream 10.0kb upstream 12242   true Lsat_1_v8_lg_6: 47362806-47375047 Lactuca sativa
Lsat_1_v5_gn_6_35421 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 47362806-47372805 Lactuca sativa
Lsat_1_v5_gn_6_35421 10.0kb downstream 10.0kb downstream 12242   true Lsat_1_v8_lg_6: 47372806-47385047 Lactuca sativa
Lsat_1_v5_gn_6_35421 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 47375048-47385047 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473794 5263 Asterids View MSA
123748303 5271 Pentapetalae View MSA
122796873 5272 Eudicot View MSA
122050146 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain