Gene : Lsat_1_v5_gn_6_35600 L. sativa V8
Defline:  (1 of 1) PTHR14009//PTHR14009:SF9 - LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN // LETM1-LIKE PROTEIN Genomic Order:  1095
Name:  ? Lsat_1_v5_gn_6_35600 Secondary Identifier:  ? PAC:38942014
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_35600 0.5kb upstream 0.5kb upstream 8352   true Lsat_1_v8_lg_6: 49431308-49439659 Lactuca sativa
Lsat_1_v5_gn_6_35600 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 49439160-49439659 Lactuca sativa
Lsat_1_v5_gn_6_35600 0.5kb downstream 0.5kb downstream 8352   true Lsat_1_v8_lg_6: 49430808-49439159 Lactuca sativa
Lsat_1_v5_gn_6_35600 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 49430808-49431307 Lactuca sativa
Lsat_1_v5_gn_6_35600 1.0kb upstream 1.0kb upstream 8852   true Lsat_1_v8_lg_6: 49431308-49440159 Lactuca sativa
Lsat_1_v5_gn_6_35600 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 49439160-49440159 Lactuca sativa
Lsat_1_v5_gn_6_35600 1.0kb downstream 1.0kb downstream 8852   true Lsat_1_v8_lg_6: 49430308-49439159 Lactuca sativa
Lsat_1_v5_gn_6_35600 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 49430308-49431307 Lactuca sativa
Lsat_1_v5_gn_6_35600 2.0kb upstream 2.0kb upstream 9852   true Lsat_1_v8_lg_6: 49431308-49441159 Lactuca sativa
Lsat_1_v5_gn_6_35600 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 49439160-49441159 Lactuca sativa
Lsat_1_v5_gn_6_35600 2.0kb downstream 2.0kb downstream 9852   true Lsat_1_v8_lg_6: 49429308-49439159 Lactuca sativa
Lsat_1_v5_gn_6_35600 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 49429308-49431307 Lactuca sativa
Lsat_1_v5_gn_6_35600 5.0kb upstream 5.0kb upstream 12852   true Lsat_1_v8_lg_6: 49431308-49444159 Lactuca sativa
Lsat_1_v5_gn_6_35600 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 49439160-49444159 Lactuca sativa
Lsat_1_v5_gn_6_35600 5.0kb downstream 5.0kb downstream 12852   true Lsat_1_v8_lg_6: 49426308-49439159 Lactuca sativa
Lsat_1_v5_gn_6_35600 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 49426308-49431307 Lactuca sativa
Lsat_1_v5_gn_6_35600 10.0kb upstream 10.0kb upstream 17852   true Lsat_1_v8_lg_6: 49431308-49449159 Lactuca sativa
Lsat_1_v5_gn_6_35600 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 49439160-49449159 Lactuca sativa
Lsat_1_v5_gn_6_35600 10.0kb downstream 10.0kb downstream 17852   true Lsat_1_v8_lg_6: 49421308-49439159 Lactuca sativa
Lsat_1_v5_gn_6_35600 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 49421308-49431307 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473723 5263 Asterids View MSA
123740190 5271 Pentapetalae View MSA
122788808 5272 Eudicot View MSA
122047969 5273 Angiosperm View MSA
121348078 5274 Embryophyte View MSA
123380722 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain