Gene : Lsat_1_v5_gn_6_38260 L. sativa V8
Defline:  (1 of 1) PTHR12775 - PROTEIN C20ORF43 HOMOLOG Genomic Order:  1162
Name:  ? Lsat_1_v5_gn_6_38260 Secondary Identifier:  ? PAC:38937062
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_38260 0.5kb upstream 0.5kb upstream 1989   true Lsat_1_v8_lg_6: 52158615-52160603 Lactuca sativa
Lsat_1_v5_gn_6_38260 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 52158615-52159114 Lactuca sativa
Lsat_1_v5_gn_6_38260 0.5kb downstream 0.5kb downstream 1989   true Lsat_1_v8_lg_6: 52159115-52161103 Lactuca sativa
Lsat_1_v5_gn_6_38260 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 52160604-52161103 Lactuca sativa
Lsat_1_v5_gn_6_38260 1.0kb upstream 1.0kb upstream 2489   true Lsat_1_v8_lg_6: 52158115-52160603 Lactuca sativa
Lsat_1_v5_gn_6_38260 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 52158115-52159114 Lactuca sativa
Lsat_1_v5_gn_6_38260 1.0kb downstream 1.0kb downstream 2489   true Lsat_1_v8_lg_6: 52159115-52161603 Lactuca sativa
Lsat_1_v5_gn_6_38260 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 52160604-52161603 Lactuca sativa
Lsat_1_v5_gn_6_38260 2.0kb upstream 2.0kb upstream 3489   true Lsat_1_v8_lg_6: 52157115-52160603 Lactuca sativa
Lsat_1_v5_gn_6_38260 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 52157115-52159114 Lactuca sativa
Lsat_1_v5_gn_6_38260 2.0kb downstream 2.0kb downstream 3489   true Lsat_1_v8_lg_6: 52159115-52162603 Lactuca sativa
Lsat_1_v5_gn_6_38260 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 52160604-52162603 Lactuca sativa
Lsat_1_v5_gn_6_38260 5.0kb upstream 5.0kb upstream 6489   true Lsat_1_v8_lg_6: 52154115-52160603 Lactuca sativa
Lsat_1_v5_gn_6_38260 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 52154115-52159114 Lactuca sativa
Lsat_1_v5_gn_6_38260 5.0kb downstream 5.0kb downstream 6489   true Lsat_1_v8_lg_6: 52159115-52165603 Lactuca sativa
Lsat_1_v5_gn_6_38260 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 52160604-52165603 Lactuca sativa
Lsat_1_v5_gn_6_38260 10.0kb upstream 10.0kb upstream 11489   true Lsat_1_v8_lg_6: 52149115-52160603 Lactuca sativa
Lsat_1_v5_gn_6_38260 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 52149115-52159114 Lactuca sativa
Lsat_1_v5_gn_6_38260 10.0kb downstream 10.0kb downstream 11489   true Lsat_1_v8_lg_6: 52159115-52170603 Lactuca sativa
Lsat_1_v5_gn_6_38260 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 52160604-52170603 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468674 5263 Asterids View MSA
123747269 5271 Pentapetalae View MSA
122787080 5272 Eudicot View MSA
122046209 5273 Angiosperm View MSA
121350063 5274 Embryophyte View MSA
123426844 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain