Gene : Lsat_1_v5_gn_6_38861 L. sativa V8
Defline:  (1 of 1) PTHR10183//PTHR10183:SF299 - CALPAIN // SUBFAMILY NOT NAMED Genomic Order:  1194
Name:  ? Lsat_1_v5_gn_6_38861 Secondary Identifier:  ? PAC:38937345
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_38861 0.5kb upstream 0.5kb upstream 2457   true Lsat_1_v8_lg_6: 53111372-53113828 Lactuca sativa
Lsat_1_v5_gn_6_38861 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 53111372-53111871 Lactuca sativa
Lsat_1_v5_gn_6_38861 0.5kb downstream 0.5kb downstream 2457   true Lsat_1_v8_lg_6: 53111872-53114328 Lactuca sativa
Lsat_1_v5_gn_6_38861 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 53113829-53114328 Lactuca sativa
Lsat_1_v5_gn_6_38861 1.0kb upstream 1.0kb upstream 2957   true Lsat_1_v8_lg_6: 53110872-53113828 Lactuca sativa
Lsat_1_v5_gn_6_38861 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 53110872-53111871 Lactuca sativa
Lsat_1_v5_gn_6_38861 1.0kb downstream 1.0kb downstream 2957   true Lsat_1_v8_lg_6: 53111872-53114828 Lactuca sativa
Lsat_1_v5_gn_6_38861 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 53113829-53114828 Lactuca sativa
Lsat_1_v5_gn_6_38861 2.0kb upstream 2.0kb upstream 3957   true Lsat_1_v8_lg_6: 53109872-53113828 Lactuca sativa
Lsat_1_v5_gn_6_38861 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 53109872-53111871 Lactuca sativa
Lsat_1_v5_gn_6_38861 2.0kb downstream 2.0kb downstream 3957   true Lsat_1_v8_lg_6: 53111872-53115828 Lactuca sativa
Lsat_1_v5_gn_6_38861 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 53113829-53115828 Lactuca sativa
Lsat_1_v5_gn_6_38861 5.0kb upstream 5.0kb upstream 6957   true Lsat_1_v8_lg_6: 53106872-53113828 Lactuca sativa
Lsat_1_v5_gn_6_38861 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 53106872-53111871 Lactuca sativa
Lsat_1_v5_gn_6_38861 5.0kb downstream 5.0kb downstream 6957   true Lsat_1_v8_lg_6: 53111872-53118828 Lactuca sativa
Lsat_1_v5_gn_6_38861 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 53113829-53118828 Lactuca sativa
Lsat_1_v5_gn_6_38861 10.0kb upstream 10.0kb upstream 11957   true Lsat_1_v8_lg_6: 53101872-53113828 Lactuca sativa
Lsat_1_v5_gn_6_38861 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 53101872-53111871 Lactuca sativa
Lsat_1_v5_gn_6_38861 10.0kb downstream 10.0kb downstream 11957   true Lsat_1_v8_lg_6: 53111872-53123828 Lactuca sativa
Lsat_1_v5_gn_6_38861 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 53113829-53123828 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470176 5263 Asterids View MSA
123744145 5271 Pentapetalae View MSA
122790435 5272 Eudicot View MSA
122044402 5273 Angiosperm View MSA
121345695 5274 Embryophyte View MSA
123427497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain