Gene : Lsat_1_v5_gn_6_3960 L. sativa V8
Defline:  (1 of 6) KOG3140 - Predicted membrane protein Genomic Order:  48
Name:  ? Lsat_1_v5_gn_6_3960 Secondary Identifier:  ? PAC:38941293
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_3960 0.5kb upstream 0.5kb upstream 2347   true Lsat_1_v8_lg_6: 3479537-3481883 Lactuca sativa
Lsat_1_v5_gn_6_3960 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 3479537-3480036 Lactuca sativa
Lsat_1_v5_gn_6_3960 0.5kb downstream 0.5kb downstream 2347   true Lsat_1_v8_lg_6: 3480037-3482383 Lactuca sativa
Lsat_1_v5_gn_6_3960 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 3481884-3482383 Lactuca sativa
Lsat_1_v5_gn_6_3960 1.0kb upstream 1.0kb upstream 2847   true Lsat_1_v8_lg_6: 3479037-3481883 Lactuca sativa
Lsat_1_v5_gn_6_3960 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 3479037-3480036 Lactuca sativa
Lsat_1_v5_gn_6_3960 1.0kb downstream 1.0kb downstream 2847   true Lsat_1_v8_lg_6: 3480037-3482883 Lactuca sativa
Lsat_1_v5_gn_6_3960 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 3481884-3482883 Lactuca sativa
Lsat_1_v5_gn_6_3960 2.0kb upstream 2.0kb upstream 3847   true Lsat_1_v8_lg_6: 3478037-3481883 Lactuca sativa
Lsat_1_v5_gn_6_3960 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 3478037-3480036 Lactuca sativa
Lsat_1_v5_gn_6_3960 2.0kb downstream 2.0kb downstream 3847   true Lsat_1_v8_lg_6: 3480037-3483883 Lactuca sativa
Lsat_1_v5_gn_6_3960 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 3481884-3483883 Lactuca sativa
Lsat_1_v5_gn_6_3960 5.0kb upstream 5.0kb upstream 6847   true Lsat_1_v8_lg_6: 3475037-3481883 Lactuca sativa
Lsat_1_v5_gn_6_3960 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 3475037-3480036 Lactuca sativa
Lsat_1_v5_gn_6_3960 5.0kb downstream 5.0kb downstream 6847   true Lsat_1_v8_lg_6: 3480037-3486883 Lactuca sativa
Lsat_1_v5_gn_6_3960 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 3481884-3486883 Lactuca sativa
Lsat_1_v5_gn_6_3960 10.0kb upstream 10.0kb upstream 11847   true Lsat_1_v8_lg_6: 3470037-3481883 Lactuca sativa
Lsat_1_v5_gn_6_3960 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 3470037-3480036 Lactuca sativa
Lsat_1_v5_gn_6_3960 10.0kb downstream 10.0kb downstream 11847   true Lsat_1_v8_lg_6: 3480037-3491883 Lactuca sativa
Lsat_1_v5_gn_6_3960 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 3481884-3491883 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469084 5263 Asterids View MSA
123751002 5271 Pentapetalae View MSA
122793414 5272 Eudicot View MSA
122043784 5273 Angiosperm View MSA
121348714 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain