Gene : Lsat_1_v5_gn_6_38921 L. sativa V8
Defline:  (1 of 1) PTHR23177//PTHR23177:SF20//PTHR33155//PTHR33155:SF9 - MKIAA1688 PROTEIN // RHO GTPASE-ACTIVATING PROTEIN 1-RELATED // FAMILY NOT NAMED // SUBFAMILY NOT NAMED Genomic Order:  1191
Name:  ? Lsat_1_v5_gn_6_38921 Secondary Identifier:  ? PAC:38940329
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_38921 0.5kb upstream 0.5kb upstream 3009   true Lsat_1_v8_lg_6: 53049362-53052370 Lactuca sativa
Lsat_1_v5_gn_6_38921 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 53049362-53049861 Lactuca sativa
Lsat_1_v5_gn_6_38921 0.5kb downstream 0.5kb downstream 3009   true Lsat_1_v8_lg_6: 53049862-53052870 Lactuca sativa
Lsat_1_v5_gn_6_38921 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 53052371-53052870 Lactuca sativa
Lsat_1_v5_gn_6_38921 1.0kb upstream 1.0kb upstream 3509   true Lsat_1_v8_lg_6: 53048862-53052370 Lactuca sativa
Lsat_1_v5_gn_6_38921 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 53048862-53049861 Lactuca sativa
Lsat_1_v5_gn_6_38921 1.0kb downstream 1.0kb downstream 3509   true Lsat_1_v8_lg_6: 53049862-53053370 Lactuca sativa
Lsat_1_v5_gn_6_38921 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 53052371-53053370 Lactuca sativa
Lsat_1_v5_gn_6_38921 2.0kb upstream 2.0kb upstream 4509   true Lsat_1_v8_lg_6: 53047862-53052370 Lactuca sativa
Lsat_1_v5_gn_6_38921 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 53047862-53049861 Lactuca sativa
Lsat_1_v5_gn_6_38921 2.0kb downstream 2.0kb downstream 4509   true Lsat_1_v8_lg_6: 53049862-53054370 Lactuca sativa
Lsat_1_v5_gn_6_38921 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 53052371-53054370 Lactuca sativa
Lsat_1_v5_gn_6_38921 5.0kb upstream 5.0kb upstream 7509   true Lsat_1_v8_lg_6: 53044862-53052370 Lactuca sativa
Lsat_1_v5_gn_6_38921 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 53044862-53049861 Lactuca sativa
Lsat_1_v5_gn_6_38921 5.0kb downstream 5.0kb downstream 7509   true Lsat_1_v8_lg_6: 53049862-53057370 Lactuca sativa
Lsat_1_v5_gn_6_38921 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 53052371-53057370 Lactuca sativa
Lsat_1_v5_gn_6_38921 10.0kb upstream 10.0kb upstream 12509   true Lsat_1_v8_lg_6: 53039862-53052370 Lactuca sativa
Lsat_1_v5_gn_6_38921 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 53039862-53049861 Lactuca sativa
Lsat_1_v5_gn_6_38921 10.0kb downstream 10.0kb downstream 12509   true Lsat_1_v8_lg_6: 53049862-53062370 Lactuca sativa
Lsat_1_v5_gn_6_38921 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 53052371-53062370 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475991 5263 Asterids View MSA
123748530 5271 Pentapetalae View MSA
122791760 5272 Eudicot View MSA
122045219 5273 Angiosperm View MSA
121350100 5274 Embryophyte View MSA
123381579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain