Gene : Lsat_1_v5_gn_6_42101 L. sativa V8
Defline:  (1 of 2) PTHR13258//PTHR13258:SF0 - UNCHARACTERIZED // COILED-COIL DOMAIN-CONTAINING PROTEIN 132 Genomic Order:  1306
Name:  ? Lsat_1_v5_gn_6_42101 Secondary Identifier:  ? PAC:38936933
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_42101 0.5kb upstream 0.5kb upstream 6656   true Lsat_1_v8_lg_6: 57397080-57403735 Lactuca sativa
Lsat_1_v5_gn_6_42101 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 57397080-57397579 Lactuca sativa
Lsat_1_v5_gn_6_42101 0.5kb downstream 0.5kb downstream 6656   true Lsat_1_v8_lg_6: 57397580-57404235 Lactuca sativa
Lsat_1_v5_gn_6_42101 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 57403736-57404235 Lactuca sativa
Lsat_1_v5_gn_6_42101 1.0kb upstream 1.0kb upstream 7156   true Lsat_1_v8_lg_6: 57396580-57403735 Lactuca sativa
Lsat_1_v5_gn_6_42101 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 57396580-57397579 Lactuca sativa
Lsat_1_v5_gn_6_42101 1.0kb downstream 1.0kb downstream 7156   true Lsat_1_v8_lg_6: 57397580-57404735 Lactuca sativa
Lsat_1_v5_gn_6_42101 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 57403736-57404735 Lactuca sativa
Lsat_1_v5_gn_6_42101 2.0kb upstream 2.0kb upstream 8156   true Lsat_1_v8_lg_6: 57395580-57403735 Lactuca sativa
Lsat_1_v5_gn_6_42101 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 57395580-57397579 Lactuca sativa
Lsat_1_v5_gn_6_42101 2.0kb downstream 2.0kb downstream 8156   true Lsat_1_v8_lg_6: 57397580-57405735 Lactuca sativa
Lsat_1_v5_gn_6_42101 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 57403736-57405735 Lactuca sativa
Lsat_1_v5_gn_6_42101 5.0kb upstream 5.0kb upstream 11156   true Lsat_1_v8_lg_6: 57392580-57403735 Lactuca sativa
Lsat_1_v5_gn_6_42101 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 57392580-57397579 Lactuca sativa
Lsat_1_v5_gn_6_42101 5.0kb downstream 5.0kb downstream 11156   true Lsat_1_v8_lg_6: 57397580-57408735 Lactuca sativa
Lsat_1_v5_gn_6_42101 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 57403736-57408735 Lactuca sativa
Lsat_1_v5_gn_6_42101 10.0kb upstream 10.0kb upstream 16156   true Lsat_1_v8_lg_6: 57387580-57403735 Lactuca sativa
Lsat_1_v5_gn_6_42101 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 57387580-57397579 Lactuca sativa
Lsat_1_v5_gn_6_42101 10.0kb downstream 10.0kb downstream 16156   true Lsat_1_v8_lg_6: 57397580-57413735 Lactuca sativa
Lsat_1_v5_gn_6_42101 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 57403736-57413735 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471842 5263 Asterids View MSA
123746708 5271 Pentapetalae View MSA
122787335 5272 Eudicot View MSA
122045793 5273 Angiosperm View MSA
121345284 5274 Embryophyte View MSA
123426551 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain