Gene : Lsat_1_v5_gn_6_4261 L. sativa V8
Defline:  (1 of 1) PTHR10848//PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11 // MEIOTIC RECOMBINATION PROTEIN SPO11-2 Genomic Order:  108
Name:  ? Lsat_1_v5_gn_6_4261 Secondary Identifier:  ? PAC:38939882
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_4261 0.5kb upstream 0.5kb upstream 3173   true Lsat_1_v8_lg_6: 6816948-6820120 Lactuca sativa
Lsat_1_v5_gn_6_4261 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 6816948-6817447 Lactuca sativa
Lsat_1_v5_gn_6_4261 0.5kb downstream 0.5kb downstream 3173   true Lsat_1_v8_lg_6: 6817448-6820620 Lactuca sativa
Lsat_1_v5_gn_6_4261 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 6820121-6820620 Lactuca sativa
Lsat_1_v5_gn_6_4261 1.0kb upstream 1.0kb upstream 3673   true Lsat_1_v8_lg_6: 6816448-6820120 Lactuca sativa
Lsat_1_v5_gn_6_4261 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 6816448-6817447 Lactuca sativa
Lsat_1_v5_gn_6_4261 1.0kb downstream 1.0kb downstream 3673   true Lsat_1_v8_lg_6: 6817448-6821120 Lactuca sativa
Lsat_1_v5_gn_6_4261 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 6820121-6821120 Lactuca sativa
Lsat_1_v5_gn_6_4261 2.0kb upstream 2.0kb upstream 4673   true Lsat_1_v8_lg_6: 6815448-6820120 Lactuca sativa
Lsat_1_v5_gn_6_4261 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 6815448-6817447 Lactuca sativa
Lsat_1_v5_gn_6_4261 2.0kb downstream 2.0kb downstream 4673   true Lsat_1_v8_lg_6: 6817448-6822120 Lactuca sativa
Lsat_1_v5_gn_6_4261 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 6820121-6822120 Lactuca sativa
Lsat_1_v5_gn_6_4261 5.0kb upstream 5.0kb upstream 7673   true Lsat_1_v8_lg_6: 6812448-6820120 Lactuca sativa
Lsat_1_v5_gn_6_4261 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 6812448-6817447 Lactuca sativa
Lsat_1_v5_gn_6_4261 5.0kb downstream 5.0kb downstream 7673   true Lsat_1_v8_lg_6: 6817448-6825120 Lactuca sativa
Lsat_1_v5_gn_6_4261 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 6820121-6825120 Lactuca sativa
Lsat_1_v5_gn_6_4261 10.0kb upstream 10.0kb upstream 12673   true Lsat_1_v8_lg_6: 6807448-6820120 Lactuca sativa
Lsat_1_v5_gn_6_4261 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 6807448-6817447 Lactuca sativa
Lsat_1_v5_gn_6_4261 10.0kb downstream 10.0kb downstream 12673   true Lsat_1_v8_lg_6: 6817448-6830120 Lactuca sativa
Lsat_1_v5_gn_6_4261 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 6820121-6830120 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478755 5263 Asterids View MSA
123749374 5271 Pentapetalae View MSA
122793256 5272 Eudicot View MSA
122044830 5273 Angiosperm View MSA
121350394 5274 Embryophyte View MSA
123427912 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain