Gene : Lsat_1_v5_gn_6_4461 L. sativa V8
Defline:  (1 of 2) PTHR22814//PTHR22814:SF77 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING PROTEIN Genomic Order:  132
Name:  ? Lsat_1_v5_gn_6_4461 Secondary Identifier:  ? PAC:38941565
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_4461 0.5kb upstream 0.5kb upstream 1780   true Lsat_1_v8_lg_6: 8367145-8368924 Lactuca sativa
Lsat_1_v5_gn_6_4461 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 8367145-8367644 Lactuca sativa
Lsat_1_v5_gn_6_4461 0.5kb downstream 0.5kb downstream 1780   true Lsat_1_v8_lg_6: 8367645-8369424 Lactuca sativa
Lsat_1_v5_gn_6_4461 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 8368925-8369424 Lactuca sativa
Lsat_1_v5_gn_6_4461 1.0kb upstream 1.0kb upstream 2280   true Lsat_1_v8_lg_6: 8366645-8368924 Lactuca sativa
Lsat_1_v5_gn_6_4461 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 8366645-8367644 Lactuca sativa
Lsat_1_v5_gn_6_4461 1.0kb downstream 1.0kb downstream 2280   true Lsat_1_v8_lg_6: 8367645-8369924 Lactuca sativa
Lsat_1_v5_gn_6_4461 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 8368925-8369924 Lactuca sativa
Lsat_1_v5_gn_6_4461 2.0kb upstream 2.0kb upstream 3280   true Lsat_1_v8_lg_6: 8365645-8368924 Lactuca sativa
Lsat_1_v5_gn_6_4461 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 8365645-8367644 Lactuca sativa
Lsat_1_v5_gn_6_4461 2.0kb downstream 2.0kb downstream 3280   true Lsat_1_v8_lg_6: 8367645-8370924 Lactuca sativa
Lsat_1_v5_gn_6_4461 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 8368925-8370924 Lactuca sativa
Lsat_1_v5_gn_6_4461 5.0kb upstream 5.0kb upstream 6280   true Lsat_1_v8_lg_6: 8362645-8368924 Lactuca sativa
Lsat_1_v5_gn_6_4461 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 8362645-8367644 Lactuca sativa
Lsat_1_v5_gn_6_4461 5.0kb downstream 5.0kb downstream 6280   true Lsat_1_v8_lg_6: 8367645-8373924 Lactuca sativa
Lsat_1_v5_gn_6_4461 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 8368925-8373924 Lactuca sativa
Lsat_1_v5_gn_6_4461 10.0kb upstream 10.0kb upstream 11280   true Lsat_1_v8_lg_6: 8357645-8368924 Lactuca sativa
Lsat_1_v5_gn_6_4461 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 8357645-8367644 Lactuca sativa
Lsat_1_v5_gn_6_4461 10.0kb downstream 10.0kb downstream 11280   true Lsat_1_v8_lg_6: 8367645-8378924 Lactuca sativa
Lsat_1_v5_gn_6_4461 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 8368925-8378924 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477795 5263 Asterids View MSA
123751300 5271 Pentapetalae View MSA
122793053 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain