Gene : Lsat_1_v5_gn_6_84820 L. sativa V8
Defline:  (1 of 27) 3.2.1.4 - Cellulase / Endoglucanase Genomic Order:  2475
Name:  ? Lsat_1_v5_gn_6_84820 Secondary Identifier:  ? PAC:38941168
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_84820 0.5kb upstream 0.5kb upstream 3195   true Lsat_1_v8_lg_6: 142181648-142184842 Lactuca sativa
Lsat_1_v5_gn_6_84820 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 142181648-142182147 Lactuca sativa
Lsat_1_v5_gn_6_84820 0.5kb downstream 0.5kb downstream 3195   true Lsat_1_v8_lg_6: 142182148-142185342 Lactuca sativa
Lsat_1_v5_gn_6_84820 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 142184843-142185342 Lactuca sativa
Lsat_1_v5_gn_6_84820 1.0kb upstream 1.0kb upstream 3695   true Lsat_1_v8_lg_6: 142181148-142184842 Lactuca sativa
Lsat_1_v5_gn_6_84820 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 142181148-142182147 Lactuca sativa
Lsat_1_v5_gn_6_84820 1.0kb downstream 1.0kb downstream 3695   true Lsat_1_v8_lg_6: 142182148-142185842 Lactuca sativa
Lsat_1_v5_gn_6_84820 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 142184843-142185842 Lactuca sativa
Lsat_1_v5_gn_6_84820 2.0kb upstream 2.0kb upstream 4695   true Lsat_1_v8_lg_6: 142180148-142184842 Lactuca sativa
Lsat_1_v5_gn_6_84820 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 142180148-142182147 Lactuca sativa
Lsat_1_v5_gn_6_84820 2.0kb downstream 2.0kb downstream 4695   true Lsat_1_v8_lg_6: 142182148-142186842 Lactuca sativa
Lsat_1_v5_gn_6_84820 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 142184843-142186842 Lactuca sativa
Lsat_1_v5_gn_6_84820 5.0kb upstream 5.0kb upstream 7695   true Lsat_1_v8_lg_6: 142177148-142184842 Lactuca sativa
Lsat_1_v5_gn_6_84820 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 142177148-142182147 Lactuca sativa
Lsat_1_v5_gn_6_84820 5.0kb downstream 5.0kb downstream 7695   true Lsat_1_v8_lg_6: 142182148-142189842 Lactuca sativa
Lsat_1_v5_gn_6_84820 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 142184843-142189842 Lactuca sativa
Lsat_1_v5_gn_6_84820 10.0kb upstream 10.0kb upstream 12695   true Lsat_1_v8_lg_6: 142172148-142184842 Lactuca sativa
Lsat_1_v5_gn_6_84820 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 142172148-142182147 Lactuca sativa
Lsat_1_v5_gn_6_84820 10.0kb downstream 10.0kb downstream 12695   true Lsat_1_v8_lg_6: 142182148-142194842 Lactuca sativa
Lsat_1_v5_gn_6_84820 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 142184843-142194842 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031669 5273 Angiosperm View MSA
121478512 5263 Asterids View MSA
123747518 5271 Pentapetalae View MSA
122798100 5272 Eudicot View MSA
121351116 5274 Embryophyte View MSA
123426514 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain