Gene : Lsat_1_v5_gn_6_86341 L. sativa V8
Defline:  (1 of 2) PTHR13286//PTHR13286:SF8 - SAP30 // SUBFAMILY NOT NAMED Genomic Order:  2497
Name:  ? Lsat_1_v5_gn_6_86341 Secondary Identifier:  ? PAC:38937560
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_86341 0.5kb upstream 0.5kb upstream 3783   true Lsat_1_v8_lg_6: 143254489-143258271 Lactuca sativa
Lsat_1_v5_gn_6_86341 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 143257772-143258271 Lactuca sativa
Lsat_1_v5_gn_6_86341 0.5kb downstream 0.5kb downstream 3783   true Lsat_1_v8_lg_6: 143253989-143257771 Lactuca sativa
Lsat_1_v5_gn_6_86341 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 143253989-143254488 Lactuca sativa
Lsat_1_v5_gn_6_86341 1.0kb upstream 1.0kb upstream 4283   true Lsat_1_v8_lg_6: 143254489-143258771 Lactuca sativa
Lsat_1_v5_gn_6_86341 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 143257772-143258771 Lactuca sativa
Lsat_1_v5_gn_6_86341 1.0kb downstream 1.0kb downstream 4283   true Lsat_1_v8_lg_6: 143253489-143257771 Lactuca sativa
Lsat_1_v5_gn_6_86341 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 143253489-143254488 Lactuca sativa
Lsat_1_v5_gn_6_86341 2.0kb upstream 2.0kb upstream 5283   true Lsat_1_v8_lg_6: 143254489-143259771 Lactuca sativa
Lsat_1_v5_gn_6_86341 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 143257772-143259771 Lactuca sativa
Lsat_1_v5_gn_6_86341 2.0kb downstream 2.0kb downstream 5283   true Lsat_1_v8_lg_6: 143252489-143257771 Lactuca sativa
Lsat_1_v5_gn_6_86341 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 143252489-143254488 Lactuca sativa
Lsat_1_v5_gn_6_86341 5.0kb upstream 5.0kb upstream 8283   true Lsat_1_v8_lg_6: 143254489-143262771 Lactuca sativa
Lsat_1_v5_gn_6_86341 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 143257772-143262771 Lactuca sativa
Lsat_1_v5_gn_6_86341 5.0kb downstream 5.0kb downstream 8283   true Lsat_1_v8_lg_6: 143249489-143257771 Lactuca sativa
Lsat_1_v5_gn_6_86341 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 143249489-143254488 Lactuca sativa
Lsat_1_v5_gn_6_86341 10.0kb upstream 10.0kb upstream 13283   true Lsat_1_v8_lg_6: 143254489-143267771 Lactuca sativa
Lsat_1_v5_gn_6_86341 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 143257772-143267771 Lactuca sativa
Lsat_1_v5_gn_6_86341 10.0kb downstream 10.0kb downstream 13283   true Lsat_1_v8_lg_6: 143244489-143257771 Lactuca sativa
Lsat_1_v5_gn_6_86341 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 143244489-143254488 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476987 5263 Asterids View MSA
123744780 5271 Pentapetalae View MSA
122793976 5272 Eudicot View MSA
122051007 5273 Angiosperm View MSA
121350494 5274 Embryophyte View MSA
123427737 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain