Gene : Lsat_1_v5_gn_6_87440 L. sativa V8
Defline:  (1 of 8) PF12043 - Domain of unknown function (DUF3527) (DUF3527) Genomic Order:  2508
Name:  ? Lsat_1_v5_gn_6_87440 Secondary Identifier:  ? PAC:38938030
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_87440 0.5kb upstream 0.5kb upstream 3875   true Lsat_1_v8_lg_6: 143926175-143930049 Lactuca sativa
Lsat_1_v5_gn_6_87440 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 143929550-143930049 Lactuca sativa
Lsat_1_v5_gn_6_87440 0.5kb downstream 0.5kb downstream 3875   true Lsat_1_v8_lg_6: 143925675-143929549 Lactuca sativa
Lsat_1_v5_gn_6_87440 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 143925675-143926174 Lactuca sativa
Lsat_1_v5_gn_6_87440 1.0kb upstream 1.0kb upstream 4375   true Lsat_1_v8_lg_6: 143926175-143930549 Lactuca sativa
Lsat_1_v5_gn_6_87440 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 143929550-143930549 Lactuca sativa
Lsat_1_v5_gn_6_87440 1.0kb downstream 1.0kb downstream 4375   true Lsat_1_v8_lg_6: 143925175-143929549 Lactuca sativa
Lsat_1_v5_gn_6_87440 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 143925175-143926174 Lactuca sativa
Lsat_1_v5_gn_6_87440 2.0kb upstream 2.0kb upstream 5375   true Lsat_1_v8_lg_6: 143926175-143931549 Lactuca sativa
Lsat_1_v5_gn_6_87440 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 143929550-143931549 Lactuca sativa
Lsat_1_v5_gn_6_87440 2.0kb downstream 2.0kb downstream 5375   true Lsat_1_v8_lg_6: 143924175-143929549 Lactuca sativa
Lsat_1_v5_gn_6_87440 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 143924175-143926174 Lactuca sativa
Lsat_1_v5_gn_6_87440 5.0kb upstream 5.0kb upstream 8375   true Lsat_1_v8_lg_6: 143926175-143934549 Lactuca sativa
Lsat_1_v5_gn_6_87440 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 143929550-143934549 Lactuca sativa
Lsat_1_v5_gn_6_87440 5.0kb downstream 5.0kb downstream 8375   true Lsat_1_v8_lg_6: 143921175-143929549 Lactuca sativa
Lsat_1_v5_gn_6_87440 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 143921175-143926174 Lactuca sativa
Lsat_1_v5_gn_6_87440 10.0kb upstream 10.0kb upstream 13375   true Lsat_1_v8_lg_6: 143926175-143939549 Lactuca sativa
Lsat_1_v5_gn_6_87440 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 143929550-143939549 Lactuca sativa
Lsat_1_v5_gn_6_87440 10.0kb downstream 10.0kb downstream 13375   true Lsat_1_v8_lg_6: 143916175-143929549 Lactuca sativa
Lsat_1_v5_gn_6_87440 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 143916175-143926174 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479257 5263 Asterids View MSA
123751410 5271 Pentapetalae View MSA
122793362 5272 Eudicot View MSA
122047262 5273 Angiosperm View MSA
121310717 5274 Embryophyte View MSA
123348134 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain