Gene : Lsat_1_v5_gn_6_88321 L. sativa V8
Defline:  (1 of 2) PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Genomic Order:  2562
Name:  ? Lsat_1_v5_gn_6_88321 Secondary Identifier:  ? PAC:38938505
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_88321 0.5kb upstream 0.5kb upstream 3901   true Lsat_1_v8_lg_6: 145904253-145908153 Lactuca sativa
Lsat_1_v5_gn_6_88321 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 145907654-145908153 Lactuca sativa
Lsat_1_v5_gn_6_88321 0.5kb downstream 0.5kb downstream 3901   true Lsat_1_v8_lg_6: 145903753-145907653 Lactuca sativa
Lsat_1_v5_gn_6_88321 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 145903753-145904252 Lactuca sativa
Lsat_1_v5_gn_6_88321 1.0kb upstream 1.0kb upstream 4401   true Lsat_1_v8_lg_6: 145904253-145908653 Lactuca sativa
Lsat_1_v5_gn_6_88321 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 145907654-145908653 Lactuca sativa
Lsat_1_v5_gn_6_88321 1.0kb downstream 1.0kb downstream 4401   true Lsat_1_v8_lg_6: 145903253-145907653 Lactuca sativa
Lsat_1_v5_gn_6_88321 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 145903253-145904252 Lactuca sativa
Lsat_1_v5_gn_6_88321 2.0kb upstream 2.0kb upstream 5401   true Lsat_1_v8_lg_6: 145904253-145909653 Lactuca sativa
Lsat_1_v5_gn_6_88321 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 145907654-145909653 Lactuca sativa
Lsat_1_v5_gn_6_88321 2.0kb downstream 2.0kb downstream 5401   true Lsat_1_v8_lg_6: 145902253-145907653 Lactuca sativa
Lsat_1_v5_gn_6_88321 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 145902253-145904252 Lactuca sativa
Lsat_1_v5_gn_6_88321 5.0kb upstream 5.0kb upstream 8401   true Lsat_1_v8_lg_6: 145904253-145912653 Lactuca sativa
Lsat_1_v5_gn_6_88321 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 145907654-145912653 Lactuca sativa
Lsat_1_v5_gn_6_88321 5.0kb downstream 5.0kb downstream 8401   true Lsat_1_v8_lg_6: 145899253-145907653 Lactuca sativa
Lsat_1_v5_gn_6_88321 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 145899253-145904252 Lactuca sativa
Lsat_1_v5_gn_6_88321 10.0kb upstream 10.0kb upstream 13401   true Lsat_1_v8_lg_6: 145904253-145917653 Lactuca sativa
Lsat_1_v5_gn_6_88321 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 145907654-145917653 Lactuca sativa
Lsat_1_v5_gn_6_88321 10.0kb downstream 10.0kb downstream 13401   true Lsat_1_v8_lg_6: 145894253-145907653 Lactuca sativa
Lsat_1_v5_gn_6_88321 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 145894253-145904252 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481218 5263 Asterids View MSA
123751107 5271 Pentapetalae View MSA
122796943 5272 Eudicot View MSA
122050104 5273 Angiosperm View MSA
121351335 5274 Embryophyte View MSA
123424447 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain