Gene : Lsat_1_v5_gn_6_90321 L. sativa V8
Defline:  (1 of 1) PTHR10683//PTHR10683:SF10 - TRANSALDOLASE // TRANSALDOLASE-LIKE PROTEIN Genomic Order:  2629
Name:  ? Lsat_1_v5_gn_6_90321 Secondary Identifier:  ? PAC:38936668
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa NONOXIPENT-PWY Lactuca sativa pathologic  
Lsativa PENTOSE-P-PWY Lactuca sativa pathologic  
Lsativa PWY-5723 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_90321 0.5kb upstream 0.5kb upstream 2956   true Lsat_1_v8_lg_6: 150497832-150500787 Lactuca sativa
Lsat_1_v5_gn_6_90321 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 150500288-150500787 Lactuca sativa
Lsat_1_v5_gn_6_90321 0.5kb downstream 0.5kb downstream 2956   true Lsat_1_v8_lg_6: 150497332-150500287 Lactuca sativa
Lsat_1_v5_gn_6_90321 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 150497332-150497831 Lactuca sativa
Lsat_1_v5_gn_6_90321 1.0kb upstream 1.0kb upstream 3456   true Lsat_1_v8_lg_6: 150497832-150501287 Lactuca sativa
Lsat_1_v5_gn_6_90321 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 150500288-150501287 Lactuca sativa
Lsat_1_v5_gn_6_90321 1.0kb downstream 1.0kb downstream 3456   true Lsat_1_v8_lg_6: 150496832-150500287 Lactuca sativa
Lsat_1_v5_gn_6_90321 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 150496832-150497831 Lactuca sativa
Lsat_1_v5_gn_6_90321 2.0kb upstream 2.0kb upstream 4456   true Lsat_1_v8_lg_6: 150497832-150502287 Lactuca sativa
Lsat_1_v5_gn_6_90321 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 150500288-150502287 Lactuca sativa
Lsat_1_v5_gn_6_90321 2.0kb downstream 2.0kb downstream 4456   true Lsat_1_v8_lg_6: 150495832-150500287 Lactuca sativa
Lsat_1_v5_gn_6_90321 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 150495832-150497831 Lactuca sativa
Lsat_1_v5_gn_6_90321 5.0kb upstream 5.0kb upstream 7456   true Lsat_1_v8_lg_6: 150497832-150505287 Lactuca sativa
Lsat_1_v5_gn_6_90321 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 150500288-150505287 Lactuca sativa
Lsat_1_v5_gn_6_90321 5.0kb downstream 5.0kb downstream 7456   true Lsat_1_v8_lg_6: 150492832-150500287 Lactuca sativa
Lsat_1_v5_gn_6_90321 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 150492832-150497831 Lactuca sativa
Lsat_1_v5_gn_6_90321 10.0kb upstream 10.0kb upstream 12456   true Lsat_1_v8_lg_6: 150497832-150510287 Lactuca sativa
Lsat_1_v5_gn_6_90321 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 150500288-150510287 Lactuca sativa
Lsat_1_v5_gn_6_90321 10.0kb downstream 10.0kb downstream 12456   true Lsat_1_v8_lg_6: 150487832-150500287 Lactuca sativa
Lsat_1_v5_gn_6_90321 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 150487832-150497831 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468444 5263 Asterids View MSA
123737527 5271 Pentapetalae View MSA
122787081 5272 Eudicot View MSA
122043979 5273 Angiosperm View MSA
121346789 5274 Embryophyte View MSA
123424119 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain