Gene : Lsat_1_v5_gn_6_96420 L. sativa V8
Defline:  (1 of 1) 1.1.1.35//4.2.1.17//4.2.1.55//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // 3-hydroxybutyryl-CoA dehydratase / Crotonase // 3-hydroxybutyryl-CoA epimerase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase Genomic Order:  2779
Name:  ? Lsat_1_v5_gn_6_96420 Secondary Identifier:  ? PAC:38936781
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Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ILEUDEG-PWY Lactuca sativa pathologic  
Lsativa PWY-5136 Lactuca sativa pathologic  
Lsativa PWY-5137 Lactuca sativa pathologic  
Lsativa PWY-5138 Lactuca sativa pathologic  
Lsativa PWY-561 Lactuca sativa pathologic  
Lsativa PWY-6435 Lactuca sativa pathologic  
Lsativa PWY-6837 Lactuca sativa pathologic  
Lsativa PWY-7036 Lactuca sativa pathologic  
Lsativa PWY-735 Lactuca sativa pathologic  
Lsativa PWY-7606 Lactuca sativa pathologic  
Lsativa PWY-7726 Lactuca sativa pathologic  
Lsativa VALDEG-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_96420 0.5kb upstream 0.5kb upstream 5315   true Lsat_1_v8_lg_6: 157341018-157346332 Lactuca sativa
Lsat_1_v5_gn_6_96420 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 157341018-157341517 Lactuca sativa
Lsat_1_v5_gn_6_96420 0.5kb downstream 0.5kb downstream 5315   true Lsat_1_v8_lg_6: 157341518-157346832 Lactuca sativa
Lsat_1_v5_gn_6_96420 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 157346333-157346832 Lactuca sativa
Lsat_1_v5_gn_6_96420 1.0kb upstream 1.0kb upstream 5815   true Lsat_1_v8_lg_6: 157340518-157346332 Lactuca sativa
Lsat_1_v5_gn_6_96420 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 157340518-157341517 Lactuca sativa
Lsat_1_v5_gn_6_96420 1.0kb downstream 1.0kb downstream 5815   true Lsat_1_v8_lg_6: 157341518-157347332 Lactuca sativa
Lsat_1_v5_gn_6_96420 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 157346333-157347332 Lactuca sativa
Lsat_1_v5_gn_6_96420 2.0kb upstream 2.0kb upstream 6815   true Lsat_1_v8_lg_6: 157339518-157346332 Lactuca sativa
Lsat_1_v5_gn_6_96420 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 157339518-157341517 Lactuca sativa
Lsat_1_v5_gn_6_96420 2.0kb downstream 2.0kb downstream 6815   true Lsat_1_v8_lg_6: 157341518-157348332 Lactuca sativa
Lsat_1_v5_gn_6_96420 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 157346333-157348332 Lactuca sativa
Lsat_1_v5_gn_6_96420 5.0kb upstream 5.0kb upstream 9815   true Lsat_1_v8_lg_6: 157336518-157346332 Lactuca sativa
Lsat_1_v5_gn_6_96420 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 157336518-157341517 Lactuca sativa
Lsat_1_v5_gn_6_96420 5.0kb downstream 5.0kb downstream 9815   true Lsat_1_v8_lg_6: 157341518-157351332 Lactuca sativa
Lsat_1_v5_gn_6_96420 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 157346333-157351332 Lactuca sativa
Lsat_1_v5_gn_6_96420 10.0kb upstream 10.0kb upstream 14815   true Lsat_1_v8_lg_6: 157331518-157346332 Lactuca sativa
Lsat_1_v5_gn_6_96420 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 157331518-157341517 Lactuca sativa
Lsat_1_v5_gn_6_96420 10.0kb downstream 10.0kb downstream 14815   true Lsat_1_v8_lg_6: 157341518-157356332 Lactuca sativa
Lsat_1_v5_gn_6_96420 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 157346333-157356332 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474651 5263 Asterids View MSA
123740661 5271 Pentapetalae View MSA
122785876 5272 Eudicot View MSA
122047259 5273 Angiosperm View MSA
121345387 5274 Embryophyte View MSA
123424743 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain