Gene : Lsat_1_v5_gn_6_96620 L. sativa V8
Defline:  (1 of 1) PTHR11802//PTHR11802:SF20 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE // SUBFAMILY NOT NAMED Genomic Order:  2829
Name:  ? Lsat_1_v5_gn_6_96620 Secondary Identifier:  ? PAC:38937145
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_96620 0.5kb upstream 0.5kb upstream 4196   true Lsat_1_v8_lg_6: 158625357-158629552 Lactuca sativa
Lsat_1_v5_gn_6_96620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 158629053-158629552 Lactuca sativa
Lsat_1_v5_gn_6_96620 0.5kb downstream 0.5kb downstream 4196   true Lsat_1_v8_lg_6: 158624857-158629052 Lactuca sativa
Lsat_1_v5_gn_6_96620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 158624857-158625356 Lactuca sativa
Lsat_1_v5_gn_6_96620 1.0kb upstream 1.0kb upstream 4696   true Lsat_1_v8_lg_6: 158625357-158630052 Lactuca sativa
Lsat_1_v5_gn_6_96620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 158629053-158630052 Lactuca sativa
Lsat_1_v5_gn_6_96620 1.0kb downstream 1.0kb downstream 4696   true Lsat_1_v8_lg_6: 158624357-158629052 Lactuca sativa
Lsat_1_v5_gn_6_96620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 158624357-158625356 Lactuca sativa
Lsat_1_v5_gn_6_96620 2.0kb upstream 2.0kb upstream 5696   true Lsat_1_v8_lg_6: 158625357-158631052 Lactuca sativa
Lsat_1_v5_gn_6_96620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 158629053-158631052 Lactuca sativa
Lsat_1_v5_gn_6_96620 2.0kb downstream 2.0kb downstream 5696   true Lsat_1_v8_lg_6: 158623357-158629052 Lactuca sativa
Lsat_1_v5_gn_6_96620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 158623357-158625356 Lactuca sativa
Lsat_1_v5_gn_6_96620 5.0kb upstream 5.0kb upstream 8696   true Lsat_1_v8_lg_6: 158625357-158634052 Lactuca sativa
Lsat_1_v5_gn_6_96620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 158629053-158634052 Lactuca sativa
Lsat_1_v5_gn_6_96620 5.0kb downstream 5.0kb downstream 8696   true Lsat_1_v8_lg_6: 158620357-158629052 Lactuca sativa
Lsat_1_v5_gn_6_96620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 158620357-158625356 Lactuca sativa
Lsat_1_v5_gn_6_96620 10.0kb upstream 10.0kb upstream 13696   true Lsat_1_v8_lg_6: 158625357-158639052 Lactuca sativa
Lsat_1_v5_gn_6_96620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 158629053-158639052 Lactuca sativa
Lsat_1_v5_gn_6_96620 10.0kb downstream 10.0kb downstream 13696   true Lsat_1_v8_lg_6: 158615357-158629052 Lactuca sativa
Lsat_1_v5_gn_6_96620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 158615357-158625356 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469278 5263 Asterids View MSA
123737952 5271 Pentapetalae View MSA
122791491 5272 Eudicot View MSA
122043115 5273 Angiosperm View MSA
121351274 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain