Gene : Lsat_1_v5_gn_6_9661 L. sativa V8
Defline:  (1 of 3) PTHR12290:SF18 - PROTEIN CORNICHON HOMOLOG 3-RELATED Genomic Order:  268
Name:  ? Lsat_1_v5_gn_6_9661 Secondary Identifier:  ? PAC:38939086
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_9661 0.5kb upstream 0.5kb upstream 2130   true Lsat_1_v8_lg_6: 13068781-13070910 Lactuca sativa
Lsat_1_v5_gn_6_9661 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 13070411-13070910 Lactuca sativa
Lsat_1_v5_gn_6_9661 0.5kb downstream 0.5kb downstream 2130   true Lsat_1_v8_lg_6: 13068281-13070410 Lactuca sativa
Lsat_1_v5_gn_6_9661 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 13068281-13068780 Lactuca sativa
Lsat_1_v5_gn_6_9661 1.0kb upstream 1.0kb upstream 2630   true Lsat_1_v8_lg_6: 13068781-13071410 Lactuca sativa
Lsat_1_v5_gn_6_9661 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 13070411-13071410 Lactuca sativa
Lsat_1_v5_gn_6_9661 1.0kb downstream 1.0kb downstream 2630   true Lsat_1_v8_lg_6: 13067781-13070410 Lactuca sativa
Lsat_1_v5_gn_6_9661 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 13067781-13068780 Lactuca sativa
Lsat_1_v5_gn_6_9661 2.0kb upstream 2.0kb upstream 3630   true Lsat_1_v8_lg_6: 13068781-13072410 Lactuca sativa
Lsat_1_v5_gn_6_9661 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 13070411-13072410 Lactuca sativa
Lsat_1_v5_gn_6_9661 2.0kb downstream 2.0kb downstream 3630   true Lsat_1_v8_lg_6: 13066781-13070410 Lactuca sativa
Lsat_1_v5_gn_6_9661 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 13066781-13068780 Lactuca sativa
Lsat_1_v5_gn_6_9661 5.0kb upstream 5.0kb upstream 6630   true Lsat_1_v8_lg_6: 13068781-13075410 Lactuca sativa
Lsat_1_v5_gn_6_9661 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 13070411-13075410 Lactuca sativa
Lsat_1_v5_gn_6_9661 5.0kb downstream 5.0kb downstream 6630   true Lsat_1_v8_lg_6: 13063781-13070410 Lactuca sativa
Lsat_1_v5_gn_6_9661 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 13063781-13068780 Lactuca sativa
Lsat_1_v5_gn_6_9661 10.0kb upstream 10.0kb upstream 11630   true Lsat_1_v8_lg_6: 13068781-13080410 Lactuca sativa
Lsat_1_v5_gn_6_9661 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 13070411-13080410 Lactuca sativa
Lsat_1_v5_gn_6_9661 10.0kb downstream 10.0kb downstream 11630   true Lsat_1_v8_lg_6: 13058781-13070410 Lactuca sativa
Lsat_1_v5_gn_6_9661 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 13058781-13068780 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471216 5263 Asterids View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain