Gene : Lsat_1_v5_gn_7_100200 L. sativa V8
Defline:  (1 of 1) PTHR10791//PTHR10791:SF57 - RAG1-ACTIVATING PROTEIN 1 // SUBFAMILY NOT NAMED Genomic Order:  3030
Name:  ? Lsat_1_v5_gn_7_100200 Secondary Identifier:  ? PAC:38910915
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_100200 0.5kb upstream 0.5kb upstream 2588   true Lsat_1_v8_lg_7: 171014051-171016638 Lactuca sativa
Lsat_1_v5_gn_7_100200 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 171016139-171016638 Lactuca sativa
Lsat_1_v5_gn_7_100200 0.5kb downstream 0.5kb downstream 2588   true Lsat_1_v8_lg_7: 171013551-171016138 Lactuca sativa
Lsat_1_v5_gn_7_100200 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 171013551-171014050 Lactuca sativa
Lsat_1_v5_gn_7_100200 1.0kb upstream 1.0kb upstream 3088   true Lsat_1_v8_lg_7: 171014051-171017138 Lactuca sativa
Lsat_1_v5_gn_7_100200 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 171016139-171017138 Lactuca sativa
Lsat_1_v5_gn_7_100200 1.0kb downstream 1.0kb downstream 3088   true Lsat_1_v8_lg_7: 171013051-171016138 Lactuca sativa
Lsat_1_v5_gn_7_100200 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 171013051-171014050 Lactuca sativa
Lsat_1_v5_gn_7_100200 2.0kb upstream 2.0kb upstream 4088   true Lsat_1_v8_lg_7: 171014051-171018138 Lactuca sativa
Lsat_1_v5_gn_7_100200 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 171016139-171018138 Lactuca sativa
Lsat_1_v5_gn_7_100200 2.0kb downstream 2.0kb downstream 4088   true Lsat_1_v8_lg_7: 171012051-171016138 Lactuca sativa
Lsat_1_v5_gn_7_100200 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 171012051-171014050 Lactuca sativa
Lsat_1_v5_gn_7_100200 5.0kb upstream 5.0kb upstream 7088   true Lsat_1_v8_lg_7: 171014051-171021138 Lactuca sativa
Lsat_1_v5_gn_7_100200 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 171016139-171021138 Lactuca sativa
Lsat_1_v5_gn_7_100200 5.0kb downstream 5.0kb downstream 7088   true Lsat_1_v8_lg_7: 171009051-171016138 Lactuca sativa
Lsat_1_v5_gn_7_100200 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 171009051-171014050 Lactuca sativa
Lsat_1_v5_gn_7_100200 10.0kb upstream 10.0kb upstream 12088   true Lsat_1_v8_lg_7: 171014051-171026138 Lactuca sativa
Lsat_1_v5_gn_7_100200 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 171016139-171026138 Lactuca sativa
Lsat_1_v5_gn_7_100200 10.0kb downstream 10.0kb downstream 12088   true Lsat_1_v8_lg_7: 171004051-171016138 Lactuca sativa
Lsat_1_v5_gn_7_100200 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 171004051-171014050 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472093 5263 Asterids View MSA
123749486 5271 Pentapetalae View MSA
122796562 5272 Eudicot View MSA
122048091 5273 Angiosperm View MSA
121310847 5274 Embryophyte View MSA
123348232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain