Gene : Lsat_1_v5_gn_7_101401 L. sativa V8
Defline:  (1 of 2) PTHR34777//PTHR34777:SF1 - FAMILY NOT NAMED // VQ MOTIF-CONTAINING PROTEIN Genomic Order:  2999
Name:  ? Lsat_1_v5_gn_7_101401 Secondary Identifier:  ? PAC:38914824
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_101401 0.5kb upstream 0.5kb upstream 1574   true Lsat_1_v8_lg_7: 168891003-168892576 Lactuca sativa
Lsat_1_v5_gn_7_101401 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 168891003-168891502 Lactuca sativa
Lsat_1_v5_gn_7_101401 0.5kb downstream 0.5kb downstream 1574   true Lsat_1_v8_lg_7: 168891503-168893076 Lactuca sativa
Lsat_1_v5_gn_7_101401 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 168892577-168893076 Lactuca sativa
Lsat_1_v5_gn_7_101401 1.0kb upstream 1.0kb upstream 2074   true Lsat_1_v8_lg_7: 168890503-168892576 Lactuca sativa
Lsat_1_v5_gn_7_101401 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 168890503-168891502 Lactuca sativa
Lsat_1_v5_gn_7_101401 1.0kb downstream 1.0kb downstream 2074   true Lsat_1_v8_lg_7: 168891503-168893576 Lactuca sativa
Lsat_1_v5_gn_7_101401 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 168892577-168893576 Lactuca sativa
Lsat_1_v5_gn_7_101401 2.0kb upstream 2.0kb upstream 3074   true Lsat_1_v8_lg_7: 168889503-168892576 Lactuca sativa
Lsat_1_v5_gn_7_101401 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 168889503-168891502 Lactuca sativa
Lsat_1_v5_gn_7_101401 2.0kb downstream 2.0kb downstream 3074   true Lsat_1_v8_lg_7: 168891503-168894576 Lactuca sativa
Lsat_1_v5_gn_7_101401 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 168892577-168894576 Lactuca sativa
Lsat_1_v5_gn_7_101401 5.0kb upstream 5.0kb upstream 6074   true Lsat_1_v8_lg_7: 168886503-168892576 Lactuca sativa
Lsat_1_v5_gn_7_101401 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 168886503-168891502 Lactuca sativa
Lsat_1_v5_gn_7_101401 5.0kb downstream 5.0kb downstream 6074   true Lsat_1_v8_lg_7: 168891503-168897576 Lactuca sativa
Lsat_1_v5_gn_7_101401 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 168892577-168897576 Lactuca sativa
Lsat_1_v5_gn_7_101401 10.0kb upstream 10.0kb upstream 11074   true Lsat_1_v8_lg_7: 168881503-168892576 Lactuca sativa
Lsat_1_v5_gn_7_101401 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 168881503-168891502 Lactuca sativa
Lsat_1_v5_gn_7_101401 10.0kb downstream 10.0kb downstream 11074   true Lsat_1_v8_lg_7: 168891503-168902576 Lactuca sativa
Lsat_1_v5_gn_7_101401 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 168892577-168902576 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026461 5273 Angiosperm View MSA
121473220 5263 Asterids View MSA
123744131 5271 Pentapetalae View MSA
122770912 5272 Eudicot View MSA
121296343 5274 Embryophyte View MSA
123334522 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain