Gene : Lsat_1_v5_gn_7_102940 L. sativa V8
Defline:  (1 of 4) PTHR13301//PTHR13301:SF69 - X-BOX TRANSCRIPTION FACTOR-RELATED // BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  3087
Name:  ? Lsat_1_v5_gn_7_102940 Secondary Identifier:  ? PAC:38909849
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_102940 0.5kb upstream 0.5kb upstream 1780   true Lsat_1_v8_lg_7: 174020604-174022383 Lactuca sativa
Lsat_1_v5_gn_7_102940 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 174021884-174022383 Lactuca sativa
Lsat_1_v5_gn_7_102940 0.5kb downstream 0.5kb downstream 1780   true Lsat_1_v8_lg_7: 174020104-174021883 Lactuca sativa
Lsat_1_v5_gn_7_102940 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 174020104-174020603 Lactuca sativa
Lsat_1_v5_gn_7_102940 1.0kb upstream 1.0kb upstream 2280   true Lsat_1_v8_lg_7: 174020604-174022883 Lactuca sativa
Lsat_1_v5_gn_7_102940 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 174021884-174022883 Lactuca sativa
Lsat_1_v5_gn_7_102940 1.0kb downstream 1.0kb downstream 2280   true Lsat_1_v8_lg_7: 174019604-174021883 Lactuca sativa
Lsat_1_v5_gn_7_102940 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 174019604-174020603 Lactuca sativa
Lsat_1_v5_gn_7_102940 2.0kb upstream 2.0kb upstream 3280   true Lsat_1_v8_lg_7: 174020604-174023883 Lactuca sativa
Lsat_1_v5_gn_7_102940 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 174021884-174023883 Lactuca sativa
Lsat_1_v5_gn_7_102940 2.0kb downstream 2.0kb downstream 3280   true Lsat_1_v8_lg_7: 174018604-174021883 Lactuca sativa
Lsat_1_v5_gn_7_102940 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 174018604-174020603 Lactuca sativa
Lsat_1_v5_gn_7_102940 5.0kb upstream 5.0kb upstream 6280   true Lsat_1_v8_lg_7: 174020604-174026883 Lactuca sativa
Lsat_1_v5_gn_7_102940 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 174021884-174026883 Lactuca sativa
Lsat_1_v5_gn_7_102940 5.0kb downstream 5.0kb downstream 6280   true Lsat_1_v8_lg_7: 174015604-174021883 Lactuca sativa
Lsat_1_v5_gn_7_102940 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 174015604-174020603 Lactuca sativa
Lsat_1_v5_gn_7_102940 10.0kb upstream 10.0kb upstream 11280   true Lsat_1_v8_lg_7: 174020604-174031883 Lactuca sativa
Lsat_1_v5_gn_7_102940 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 174021884-174031883 Lactuca sativa
Lsat_1_v5_gn_7_102940 10.0kb downstream 10.0kb downstream 11280   true Lsat_1_v8_lg_7: 174010604-174021883 Lactuca sativa
Lsat_1_v5_gn_7_102940 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 174010604-174020603 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468908 5263 Asterids View MSA
123743912 5271 Pentapetalae View MSA
122795222 5272 Eudicot View MSA
122050471 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain