Gene : Lsat_1_v5_gn_6_68341 L. sativa V8
Defline:  (1 of 2) PTHR33294:SF5 - AWPM-19-LIKE FAMILY PROTEIN Genomic Order:  2007
Name:  ? Lsat_1_v5_gn_6_68341 Secondary Identifier:  ? PAC:38939676
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_68341 0.5kb upstream 0.5kb upstream 1487   true Lsat_1_v8_lg_6: 109143474-109144960 Lactuca sativa
Lsat_1_v5_gn_6_68341 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 109143474-109143973 Lactuca sativa
Lsat_1_v5_gn_6_68341 0.5kb downstream 0.5kb downstream 1487   true Lsat_1_v8_lg_6: 109143974-109145460 Lactuca sativa
Lsat_1_v5_gn_6_68341 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 109144961-109145460 Lactuca sativa
Lsat_1_v5_gn_6_68341 1.0kb upstream 1.0kb upstream 1987   true Lsat_1_v8_lg_6: 109142974-109144960 Lactuca sativa
Lsat_1_v5_gn_6_68341 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 109142974-109143973 Lactuca sativa
Lsat_1_v5_gn_6_68341 1.0kb downstream 1.0kb downstream 1987   true Lsat_1_v8_lg_6: 109143974-109145960 Lactuca sativa
Lsat_1_v5_gn_6_68341 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 109144961-109145960 Lactuca sativa
Lsat_1_v5_gn_6_68341 2.0kb upstream 2.0kb upstream 2987   true Lsat_1_v8_lg_6: 109141974-109144960 Lactuca sativa
Lsat_1_v5_gn_6_68341 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 109141974-109143973 Lactuca sativa
Lsat_1_v5_gn_6_68341 2.0kb downstream 2.0kb downstream 2987   true Lsat_1_v8_lg_6: 109143974-109146960 Lactuca sativa
Lsat_1_v5_gn_6_68341 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 109144961-109146960 Lactuca sativa
Lsat_1_v5_gn_6_68341 5.0kb upstream 5.0kb upstream 5987   true Lsat_1_v8_lg_6: 109138974-109144960 Lactuca sativa
Lsat_1_v5_gn_6_68341 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 109138974-109143973 Lactuca sativa
Lsat_1_v5_gn_6_68341 5.0kb downstream 5.0kb downstream 5987   true Lsat_1_v8_lg_6: 109143974-109149960 Lactuca sativa
Lsat_1_v5_gn_6_68341 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 109144961-109149960 Lactuca sativa
Lsat_1_v5_gn_6_68341 10.0kb upstream 10.0kb upstream 10987   true Lsat_1_v8_lg_6: 109133974-109144960 Lactuca sativa
Lsat_1_v5_gn_6_68341 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 109133974-109143973 Lactuca sativa
Lsat_1_v5_gn_6_68341 10.0kb downstream 10.0kb downstream 10987   true Lsat_1_v8_lg_6: 109143974-109154960 Lactuca sativa
Lsat_1_v5_gn_6_68341 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 109144961-109154960 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479746 5263 Asterids View MSA
123736675 5271 Pentapetalae View MSA
122790401 5272 Eudicot View MSA
122044376 5273 Angiosperm View MSA
121349282 5274 Embryophyte View MSA
123381254 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain