Gene : Lsat_1_v5_gn_6_68821 L. sativa V8
Defline:  (1 of 1) PTHR10108//PTHR10108:SF795 - METHYLTRANSFERASE // CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE Genomic Order:  1959
Name:  ? Lsat_1_v5_gn_6_68821 Secondary Identifier:  ? PAC:38940999
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-4942 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_68821 0.5kb upstream 0.5kb upstream 12421   true Lsat_1_v8_lg_6: 103237670-103250090 Lactuca sativa
Lsat_1_v5_gn_6_68821 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 103237670-103238169 Lactuca sativa
Lsat_1_v5_gn_6_68821 0.5kb downstream 0.5kb downstream 12421   true Lsat_1_v8_lg_6: 103238170-103250590 Lactuca sativa
Lsat_1_v5_gn_6_68821 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 103250091-103250590 Lactuca sativa
Lsat_1_v5_gn_6_68821 1.0kb upstream 1.0kb upstream 12921   true Lsat_1_v8_lg_6: 103237170-103250090 Lactuca sativa
Lsat_1_v5_gn_6_68821 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 103237170-103238169 Lactuca sativa
Lsat_1_v5_gn_6_68821 1.0kb downstream 1.0kb downstream 12921   true Lsat_1_v8_lg_6: 103238170-103251090 Lactuca sativa
Lsat_1_v5_gn_6_68821 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 103250091-103251090 Lactuca sativa
Lsat_1_v5_gn_6_68821 2.0kb upstream 2.0kb upstream 13921   true Lsat_1_v8_lg_6: 103236170-103250090 Lactuca sativa
Lsat_1_v5_gn_6_68821 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 103236170-103238169 Lactuca sativa
Lsat_1_v5_gn_6_68821 2.0kb downstream 2.0kb downstream 13921   true Lsat_1_v8_lg_6: 103238170-103252090 Lactuca sativa
Lsat_1_v5_gn_6_68821 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 103250091-103252090 Lactuca sativa
Lsat_1_v5_gn_6_68821 5.0kb upstream 5.0kb upstream 16921   true Lsat_1_v8_lg_6: 103233170-103250090 Lactuca sativa
Lsat_1_v5_gn_6_68821 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 103233170-103238169 Lactuca sativa
Lsat_1_v5_gn_6_68821 5.0kb downstream 5.0kb downstream 16921   true Lsat_1_v8_lg_6: 103238170-103255090 Lactuca sativa
Lsat_1_v5_gn_6_68821 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 103250091-103255090 Lactuca sativa
Lsat_1_v5_gn_6_68821 10.0kb upstream 10.0kb upstream 21921   true Lsat_1_v8_lg_6: 103228170-103250090 Lactuca sativa
Lsat_1_v5_gn_6_68821 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 103228170-103238169 Lactuca sativa
Lsat_1_v5_gn_6_68821 10.0kb downstream 10.0kb downstream 21921   true Lsat_1_v8_lg_6: 103238170-103260090 Lactuca sativa
Lsat_1_v5_gn_6_68821 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 103250091-103260090 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468222 5263 Asterids View MSA
123737400 5271 Pentapetalae View MSA
122792723 5272 Eudicot View MSA
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain