Gene : Lsat_1_v5_gn_6_69640 L. sativa V8
Defline:  (1 of 1) PTHR21262//PTHR21262:SF12 - GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE // CA2+-ACTIVATED RELA/SPOT-LIKE PROTEIN Genomic Order:  2051
Name:  ? Lsat_1_v5_gn_6_69640 Secondary Identifier:  ? PAC:38938216
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_69640 0.5kb upstream 0.5kb upstream 3830   true Lsat_1_v8_lg_6: 116203423-116207252 Lactuca sativa
Lsat_1_v5_gn_6_69640 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 116206753-116207252 Lactuca sativa
Lsat_1_v5_gn_6_69640 0.5kb downstream 0.5kb downstream 3830   true Lsat_1_v8_lg_6: 116202923-116206752 Lactuca sativa
Lsat_1_v5_gn_6_69640 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 116202923-116203422 Lactuca sativa
Lsat_1_v5_gn_6_69640 1.0kb upstream 1.0kb upstream 4330   true Lsat_1_v8_lg_6: 116203423-116207752 Lactuca sativa
Lsat_1_v5_gn_6_69640 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 116206753-116207752 Lactuca sativa
Lsat_1_v5_gn_6_69640 1.0kb downstream 1.0kb downstream 4330   true Lsat_1_v8_lg_6: 116202423-116206752 Lactuca sativa
Lsat_1_v5_gn_6_69640 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 116202423-116203422 Lactuca sativa
Lsat_1_v5_gn_6_69640 2.0kb upstream 2.0kb upstream 5330   true Lsat_1_v8_lg_6: 116203423-116208752 Lactuca sativa
Lsat_1_v5_gn_6_69640 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 116206753-116208752 Lactuca sativa
Lsat_1_v5_gn_6_69640 2.0kb downstream 2.0kb downstream 5330   true Lsat_1_v8_lg_6: 116201423-116206752 Lactuca sativa
Lsat_1_v5_gn_6_69640 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 116201423-116203422 Lactuca sativa
Lsat_1_v5_gn_6_69640 5.0kb upstream 5.0kb upstream 8330   true Lsat_1_v8_lg_6: 116203423-116211752 Lactuca sativa
Lsat_1_v5_gn_6_69640 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 116206753-116211752 Lactuca sativa
Lsat_1_v5_gn_6_69640 5.0kb downstream 5.0kb downstream 8330   true Lsat_1_v8_lg_6: 116198423-116206752 Lactuca sativa
Lsat_1_v5_gn_6_69640 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 116198423-116203422 Lactuca sativa
Lsat_1_v5_gn_6_69640 10.0kb upstream 10.0kb upstream 13330   true Lsat_1_v8_lg_6: 116203423-116216752 Lactuca sativa
Lsat_1_v5_gn_6_69640 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 116206753-116216752 Lactuca sativa
Lsat_1_v5_gn_6_69640 10.0kb downstream 10.0kb downstream 13330   true Lsat_1_v8_lg_6: 116193423-116206752 Lactuca sativa
Lsat_1_v5_gn_6_69640 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 116193423-116203422 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474136 5263 Asterids View MSA
123740387 5271 Pentapetalae View MSA
122793647 5272 Eudicot View MSA
122044373 5273 Angiosperm View MSA
121310285 5274 Embryophyte View MSA
123347812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain