Gene : Lsat_1_v5_gn_6_71221 L. sativa V8
Defline:  (1 of 2) PTHR31636:SF13 - SCARECROW-LIKE PROTEIN 3 Genomic Order:  2083
Name:  ? Lsat_1_v5_gn_6_71221 Secondary Identifier:  ? PAC:38938807
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_71221 0.5kb upstream 0.5kb upstream 1965   true Lsat_1_v8_lg_6: 119168093-119170057 Lactuca sativa
Lsat_1_v5_gn_6_71221 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 119169558-119170057 Lactuca sativa
Lsat_1_v5_gn_6_71221 0.5kb downstream 0.5kb downstream 1965   true Lsat_1_v8_lg_6: 119167593-119169557 Lactuca sativa
Lsat_1_v5_gn_6_71221 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 119167593-119168092 Lactuca sativa
Lsat_1_v5_gn_6_71221 1.0kb upstream 1.0kb upstream 2465   true Lsat_1_v8_lg_6: 119168093-119170557 Lactuca sativa
Lsat_1_v5_gn_6_71221 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 119169558-119170557 Lactuca sativa
Lsat_1_v5_gn_6_71221 1.0kb downstream 1.0kb downstream 2465   true Lsat_1_v8_lg_6: 119167093-119169557 Lactuca sativa
Lsat_1_v5_gn_6_71221 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 119167093-119168092 Lactuca sativa
Lsat_1_v5_gn_6_71221 2.0kb upstream 2.0kb upstream 3465   true Lsat_1_v8_lg_6: 119168093-119171557 Lactuca sativa
Lsat_1_v5_gn_6_71221 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 119169558-119171557 Lactuca sativa
Lsat_1_v5_gn_6_71221 2.0kb downstream 2.0kb downstream 3465   true Lsat_1_v8_lg_6: 119166093-119169557 Lactuca sativa
Lsat_1_v5_gn_6_71221 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 119166093-119168092 Lactuca sativa
Lsat_1_v5_gn_6_71221 5.0kb upstream 5.0kb upstream 6465   true Lsat_1_v8_lg_6: 119168093-119174557 Lactuca sativa
Lsat_1_v5_gn_6_71221 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 119169558-119174557 Lactuca sativa
Lsat_1_v5_gn_6_71221 5.0kb downstream 5.0kb downstream 6465   true Lsat_1_v8_lg_6: 119163093-119169557 Lactuca sativa
Lsat_1_v5_gn_6_71221 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 119163093-119168092 Lactuca sativa
Lsat_1_v5_gn_6_71221 10.0kb upstream 10.0kb upstream 11465   true Lsat_1_v8_lg_6: 119168093-119179557 Lactuca sativa
Lsat_1_v5_gn_6_71221 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 119169558-119179557 Lactuca sativa
Lsat_1_v5_gn_6_71221 10.0kb downstream 10.0kb downstream 11465   true Lsat_1_v8_lg_6: 119158093-119169557 Lactuca sativa
Lsat_1_v5_gn_6_71221 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 119158093-119168092 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121482023 5263 Asterids View MSA
123743380 5271 Pentapetalae View MSA
122791329 5272 Eudicot View MSA
122043320 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain