Gene : Lsat_1_v5_gn_6_73800 L. sativa V8
Defline:  (1 of 2) PTHR13018//PTHR13018:SF47 - PROBABLE MEMBRANE PROTEIN DUF221-RELATED // ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN-RELATED Genomic Order:  2120
Name:  ? Lsat_1_v5_gn_6_73800 Secondary Identifier:  ? PAC:38939526
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_73800 0.5kb upstream 0.5kb upstream 7762   true Lsat_1_v8_lg_6: 121421863-121429624 Lactuca sativa
Lsat_1_v5_gn_6_73800 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 121421863-121422362 Lactuca sativa
Lsat_1_v5_gn_6_73800 0.5kb downstream 0.5kb downstream 7762   true Lsat_1_v8_lg_6: 121422363-121430124 Lactuca sativa
Lsat_1_v5_gn_6_73800 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 121429625-121430124 Lactuca sativa
Lsat_1_v5_gn_6_73800 1.0kb upstream 1.0kb upstream 8262   true Lsat_1_v8_lg_6: 121421363-121429624 Lactuca sativa
Lsat_1_v5_gn_6_73800 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 121421363-121422362 Lactuca sativa
Lsat_1_v5_gn_6_73800 1.0kb downstream 1.0kb downstream 8262   true Lsat_1_v8_lg_6: 121422363-121430624 Lactuca sativa
Lsat_1_v5_gn_6_73800 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 121429625-121430624 Lactuca sativa
Lsat_1_v5_gn_6_73800 2.0kb upstream 2.0kb upstream 9262   true Lsat_1_v8_lg_6: 121420363-121429624 Lactuca sativa
Lsat_1_v5_gn_6_73800 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 121420363-121422362 Lactuca sativa
Lsat_1_v5_gn_6_73800 2.0kb downstream 2.0kb downstream 9262   true Lsat_1_v8_lg_6: 121422363-121431624 Lactuca sativa
Lsat_1_v5_gn_6_73800 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 121429625-121431624 Lactuca sativa
Lsat_1_v5_gn_6_73800 5.0kb upstream 5.0kb upstream 12262   true Lsat_1_v8_lg_6: 121417363-121429624 Lactuca sativa
Lsat_1_v5_gn_6_73800 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 121417363-121422362 Lactuca sativa
Lsat_1_v5_gn_6_73800 5.0kb downstream 5.0kb downstream 12262   true Lsat_1_v8_lg_6: 121422363-121434624 Lactuca sativa
Lsat_1_v5_gn_6_73800 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 121429625-121434624 Lactuca sativa
Lsat_1_v5_gn_6_73800 10.0kb upstream 10.0kb upstream 17262   true Lsat_1_v8_lg_6: 121412363-121429624 Lactuca sativa
Lsat_1_v5_gn_6_73800 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 121412363-121422362 Lactuca sativa
Lsat_1_v5_gn_6_73800 10.0kb downstream 10.0kb downstream 17262   true Lsat_1_v8_lg_6: 121422363-121439624 Lactuca sativa
Lsat_1_v5_gn_6_73800 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 121429625-121439624 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471814 5263 Asterids View MSA
123745735 5271 Pentapetalae View MSA
122788976 5272 Eudicot View MSA
122046937 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121350338 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain