Gene : Lsat_1_v5_gn_6_7540 L. sativa V8
Defline:  (1 of 2) PTHR12000//PTHR12000:SF13 - HEMOGLOBINASE FAMILY MEMBER // SUBFAMILY NOT NAMED Genomic Order:  404
Name:  ? Lsat_1_v5_gn_6_7540 Secondary Identifier:  ? PAC:38939823
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_7540 0.5kb upstream 0.5kb upstream 3740   true Lsat_1_v8_lg_6: 17212831-17216570 Lactuca sativa
Lsat_1_v5_gn_6_7540 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 17216071-17216570 Lactuca sativa
Lsat_1_v5_gn_6_7540 0.5kb downstream 0.5kb downstream 3740   true Lsat_1_v8_lg_6: 17212331-17216070 Lactuca sativa
Lsat_1_v5_gn_6_7540 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 17212331-17212830 Lactuca sativa
Lsat_1_v5_gn_6_7540 1.0kb upstream 1.0kb upstream 4240   true Lsat_1_v8_lg_6: 17212831-17217070 Lactuca sativa
Lsat_1_v5_gn_6_7540 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 17216071-17217070 Lactuca sativa
Lsat_1_v5_gn_6_7540 1.0kb downstream 1.0kb downstream 4240   true Lsat_1_v8_lg_6: 17211831-17216070 Lactuca sativa
Lsat_1_v5_gn_6_7540 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 17211831-17212830 Lactuca sativa
Lsat_1_v5_gn_6_7540 2.0kb upstream 2.0kb upstream 5240   true Lsat_1_v8_lg_6: 17212831-17218070 Lactuca sativa
Lsat_1_v5_gn_6_7540 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 17216071-17218070 Lactuca sativa
Lsat_1_v5_gn_6_7540 2.0kb downstream 2.0kb downstream 5240   true Lsat_1_v8_lg_6: 17210831-17216070 Lactuca sativa
Lsat_1_v5_gn_6_7540 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 17210831-17212830 Lactuca sativa
Lsat_1_v5_gn_6_7540 5.0kb upstream 5.0kb upstream 8240   true Lsat_1_v8_lg_6: 17212831-17221070 Lactuca sativa
Lsat_1_v5_gn_6_7540 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 17216071-17221070 Lactuca sativa
Lsat_1_v5_gn_6_7540 5.0kb downstream 5.0kb downstream 8240   true Lsat_1_v8_lg_6: 17207831-17216070 Lactuca sativa
Lsat_1_v5_gn_6_7540 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 17207831-17212830 Lactuca sativa
Lsat_1_v5_gn_6_7540 10.0kb upstream 10.0kb upstream 13240   true Lsat_1_v8_lg_6: 17212831-17226070 Lactuca sativa
Lsat_1_v5_gn_6_7540 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 17216071-17226070 Lactuca sativa
Lsat_1_v5_gn_6_7540 10.0kb downstream 10.0kb downstream 13240   true Lsat_1_v8_lg_6: 17202831-17216070 Lactuca sativa
Lsat_1_v5_gn_6_7540 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 17202831-17212830 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476176 5263 Asterids View MSA
123743278 5271 Pentapetalae View MSA
122791730 5272 Eudicot View MSA
122046408 5273 Angiosperm View MSA
121350664 5274 Embryophyte View MSA
123428632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain