Gene : Lsat_1_v5_gn_6_79520 L. sativa V8
Defline:  (1 of 1) PTHR21499//PTHR21499:SF33 - ASPARTATE KINASE // HOMOSERINE DEHYDROGENASE Genomic Order:  2294
Name:  ? Lsat_1_v5_gn_6_79520 Secondary Identifier:  ? PAC:38939090
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa HOMOSERSYN-PWY Lactuca sativa pathologic  
Lsativa PWY-3001 Lactuca sativa pathologic  
Lsativa PWY-724 Lactuca sativa pathologic  
Lsativa THRESYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_79520 0.5kb upstream 0.5kb upstream 3525   true Lsat_1_v8_lg_6: 130676099-130679623 Lactuca sativa
Lsat_1_v5_gn_6_79520 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 130679124-130679623 Lactuca sativa
Lsat_1_v5_gn_6_79520 0.5kb downstream 0.5kb downstream 3525   true Lsat_1_v8_lg_6: 130675599-130679123 Lactuca sativa
Lsat_1_v5_gn_6_79520 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 130675599-130676098 Lactuca sativa
Lsat_1_v5_gn_6_79520 1.0kb upstream 1.0kb upstream 4025   true Lsat_1_v8_lg_6: 130676099-130680123 Lactuca sativa
Lsat_1_v5_gn_6_79520 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 130679124-130680123 Lactuca sativa
Lsat_1_v5_gn_6_79520 1.0kb downstream 1.0kb downstream 4025   true Lsat_1_v8_lg_6: 130675099-130679123 Lactuca sativa
Lsat_1_v5_gn_6_79520 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 130675099-130676098 Lactuca sativa
Lsat_1_v5_gn_6_79520 2.0kb upstream 2.0kb upstream 5025   true Lsat_1_v8_lg_6: 130676099-130681123 Lactuca sativa
Lsat_1_v5_gn_6_79520 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 130679124-130681123 Lactuca sativa
Lsat_1_v5_gn_6_79520 2.0kb downstream 2.0kb downstream 5025   true Lsat_1_v8_lg_6: 130674099-130679123 Lactuca sativa
Lsat_1_v5_gn_6_79520 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 130674099-130676098 Lactuca sativa
Lsat_1_v5_gn_6_79520 5.0kb upstream 5.0kb upstream 8025   true Lsat_1_v8_lg_6: 130676099-130684123 Lactuca sativa
Lsat_1_v5_gn_6_79520 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 130679124-130684123 Lactuca sativa
Lsat_1_v5_gn_6_79520 5.0kb downstream 5.0kb downstream 8025   true Lsat_1_v8_lg_6: 130671099-130679123 Lactuca sativa
Lsat_1_v5_gn_6_79520 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 130671099-130676098 Lactuca sativa
Lsat_1_v5_gn_6_79520 10.0kb upstream 10.0kb upstream 13025   true Lsat_1_v8_lg_6: 130676099-130689123 Lactuca sativa
Lsat_1_v5_gn_6_79520 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 130679124-130689123 Lactuca sativa
Lsat_1_v5_gn_6_79520 10.0kb downstream 10.0kb downstream 13025   true Lsat_1_v8_lg_6: 130666099-130679123 Lactuca sativa
Lsat_1_v5_gn_6_79520 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 130666099-130676098 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474208 5263 Asterids View MSA
123740432 5271 Pentapetalae View MSA
122769980 5272 Eudicot View MSA
122043747 5273 Angiosperm View MSA
121349256 5274 Embryophyte View MSA
123424216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain