Gene : Lsat_1_v5_gn_6_80100 L. sativa V8
Defline:  (1 of 1) K00630 - glycerol-3-phosphate O-acyltransferase (ATS1) Genomic Order:  2327
Name:  ? Lsat_1_v5_gn_6_80100 Secondary Identifier:  ? PAC:38939061
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY0-1319 Lactuca sativa pathologic  
Lsativa PWY4FS-7 Lactuca sativa pathologic  
Lsativa PWY-7411 Lactuca sativa pathologic  
Lsativa TRIGLSYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_80100 0.5kb upstream 0.5kb upstream 4322   true Lsat_1_v8_lg_6: 132287236-132291557 Lactuca sativa
Lsat_1_v5_gn_6_80100 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 132291058-132291557 Lactuca sativa
Lsat_1_v5_gn_6_80100 0.5kb downstream 0.5kb downstream 4322   true Lsat_1_v8_lg_6: 132286736-132291057 Lactuca sativa
Lsat_1_v5_gn_6_80100 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 132286736-132287235 Lactuca sativa
Lsat_1_v5_gn_6_80100 1.0kb upstream 1.0kb upstream 4822   true Lsat_1_v8_lg_6: 132287236-132292057 Lactuca sativa
Lsat_1_v5_gn_6_80100 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 132291058-132292057 Lactuca sativa
Lsat_1_v5_gn_6_80100 1.0kb downstream 1.0kb downstream 4822   true Lsat_1_v8_lg_6: 132286236-132291057 Lactuca sativa
Lsat_1_v5_gn_6_80100 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 132286236-132287235 Lactuca sativa
Lsat_1_v5_gn_6_80100 2.0kb upstream 2.0kb upstream 5822   true Lsat_1_v8_lg_6: 132287236-132293057 Lactuca sativa
Lsat_1_v5_gn_6_80100 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 132291058-132293057 Lactuca sativa
Lsat_1_v5_gn_6_80100 2.0kb downstream 2.0kb downstream 5822   true Lsat_1_v8_lg_6: 132285236-132291057 Lactuca sativa
Lsat_1_v5_gn_6_80100 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 132285236-132287235 Lactuca sativa
Lsat_1_v5_gn_6_80100 5.0kb upstream 5.0kb upstream 8822   true Lsat_1_v8_lg_6: 132287236-132296057 Lactuca sativa
Lsat_1_v5_gn_6_80100 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 132291058-132296057 Lactuca sativa
Lsat_1_v5_gn_6_80100 5.0kb downstream 5.0kb downstream 8822   true Lsat_1_v8_lg_6: 132282236-132291057 Lactuca sativa
Lsat_1_v5_gn_6_80100 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 132282236-132287235 Lactuca sativa
Lsat_1_v5_gn_6_80100 10.0kb upstream 10.0kb upstream 13822   true Lsat_1_v8_lg_6: 132287236-132301057 Lactuca sativa
Lsat_1_v5_gn_6_80100 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 132291058-132301057 Lactuca sativa
Lsat_1_v5_gn_6_80100 10.0kb downstream 10.0kb downstream 13822   true Lsat_1_v8_lg_6: 132277236-132291057 Lactuca sativa
Lsat_1_v5_gn_6_80100 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 132277236-132287235 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475420 5263 Asterids View MSA
123741043 5271 Pentapetalae View MSA
122789862 5272 Eudicot View MSA
122046647 5273 Angiosperm View MSA
121346869 5274 Embryophyte View MSA
123424445 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain