Gene : Lsat_1_v5_gn_6_80660 L. sativa V8
Defline:  (1 of 3) PTHR23198//PTHR23198:SF4 - NUCLEOPORIN // NUCLEOPORIN AUTOPEPTIDASE Genomic Order:  2349
Name:  ? Lsat_1_v5_gn_6_80660 Secondary Identifier:  ? PAC:38942142
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_80660 0.5kb upstream 0.5kb upstream 3984   true Lsat_1_v8_lg_6: 133581783-133585766 Lactuca sativa
Lsat_1_v5_gn_6_80660 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 133581783-133582282 Lactuca sativa
Lsat_1_v5_gn_6_80660 0.5kb downstream 0.5kb downstream 3984   true Lsat_1_v8_lg_6: 133582283-133586266 Lactuca sativa
Lsat_1_v5_gn_6_80660 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 133585767-133586266 Lactuca sativa
Lsat_1_v5_gn_6_80660 1.0kb upstream 1.0kb upstream 4484   true Lsat_1_v8_lg_6: 133581283-133585766 Lactuca sativa
Lsat_1_v5_gn_6_80660 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 133581283-133582282 Lactuca sativa
Lsat_1_v5_gn_6_80660 1.0kb downstream 1.0kb downstream 4484   true Lsat_1_v8_lg_6: 133582283-133586766 Lactuca sativa
Lsat_1_v5_gn_6_80660 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 133585767-133586766 Lactuca sativa
Lsat_1_v5_gn_6_80660 2.0kb upstream 2.0kb upstream 5484   true Lsat_1_v8_lg_6: 133580283-133585766 Lactuca sativa
Lsat_1_v5_gn_6_80660 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 133580283-133582282 Lactuca sativa
Lsat_1_v5_gn_6_80660 2.0kb downstream 2.0kb downstream 5484   true Lsat_1_v8_lg_6: 133582283-133587766 Lactuca sativa
Lsat_1_v5_gn_6_80660 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 133585767-133587766 Lactuca sativa
Lsat_1_v5_gn_6_80660 5.0kb upstream 5.0kb upstream 8484   true Lsat_1_v8_lg_6: 133577283-133585766 Lactuca sativa
Lsat_1_v5_gn_6_80660 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 133577283-133582282 Lactuca sativa
Lsat_1_v5_gn_6_80660 5.0kb downstream 5.0kb downstream 8484   true Lsat_1_v8_lg_6: 133582283-133590766 Lactuca sativa
Lsat_1_v5_gn_6_80660 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 133585767-133590766 Lactuca sativa
Lsat_1_v5_gn_6_80660 10.0kb upstream 10.0kb upstream 13484   true Lsat_1_v8_lg_6: 133572283-133585766 Lactuca sativa
Lsat_1_v5_gn_6_80660 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 133572283-133582282 Lactuca sativa
Lsat_1_v5_gn_6_80660 10.0kb downstream 10.0kb downstream 13484   true Lsat_1_v8_lg_6: 133582283-133595766 Lactuca sativa
Lsat_1_v5_gn_6_80660 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 133585767-133595766 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121451207 5263 Asterids View MSA
123752592 5271 Pentapetalae View MSA
122797875 5272 Eudicot View MSA
122041710 5273 Angiosperm View MSA
121349617 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain