Gene : Lsat_1_v5_gn_6_80600 L. sativa V8
Defline:  (1 of 1) PTHR31989:SF48 - PROTEIN SOMBRERO Genomic Order:  2348
Name:  ? Lsat_1_v5_gn_6_80600 Secondary Identifier:  ? PAC:38940666
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_80600 0.5kb upstream 0.5kb upstream 2528   true Lsat_1_v8_lg_6: 133558854-133561381 Lactuca sativa
Lsat_1_v5_gn_6_80600 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 133558854-133559353 Lactuca sativa
Lsat_1_v5_gn_6_80600 0.5kb downstream 0.5kb downstream 2528   true Lsat_1_v8_lg_6: 133559354-133561881 Lactuca sativa
Lsat_1_v5_gn_6_80600 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 133561382-133561881 Lactuca sativa
Lsat_1_v5_gn_6_80600 1.0kb upstream 1.0kb upstream 3028   true Lsat_1_v8_lg_6: 133558354-133561381 Lactuca sativa
Lsat_1_v5_gn_6_80600 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 133558354-133559353 Lactuca sativa
Lsat_1_v5_gn_6_80600 1.0kb downstream 1.0kb downstream 3028   true Lsat_1_v8_lg_6: 133559354-133562381 Lactuca sativa
Lsat_1_v5_gn_6_80600 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 133561382-133562381 Lactuca sativa
Lsat_1_v5_gn_6_80600 2.0kb upstream 2.0kb upstream 4028   true Lsat_1_v8_lg_6: 133557354-133561381 Lactuca sativa
Lsat_1_v5_gn_6_80600 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 133557354-133559353 Lactuca sativa
Lsat_1_v5_gn_6_80600 2.0kb downstream 2.0kb downstream 4028   true Lsat_1_v8_lg_6: 133559354-133563381 Lactuca sativa
Lsat_1_v5_gn_6_80600 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 133561382-133563381 Lactuca sativa
Lsat_1_v5_gn_6_80600 5.0kb upstream 5.0kb upstream 7028   true Lsat_1_v8_lg_6: 133554354-133561381 Lactuca sativa
Lsat_1_v5_gn_6_80600 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 133554354-133559353 Lactuca sativa
Lsat_1_v5_gn_6_80600 5.0kb downstream 5.0kb downstream 7028   true Lsat_1_v8_lg_6: 133559354-133566381 Lactuca sativa
Lsat_1_v5_gn_6_80600 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 133561382-133566381 Lactuca sativa
Lsat_1_v5_gn_6_80600 10.0kb upstream 10.0kb upstream 12028   true Lsat_1_v8_lg_6: 133549354-133561381 Lactuca sativa
Lsat_1_v5_gn_6_80600 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 133549354-133559353 Lactuca sativa
Lsat_1_v5_gn_6_80600 10.0kb downstream 10.0kb downstream 12028   true Lsat_1_v8_lg_6: 133559354-133571381 Lactuca sativa
Lsat_1_v5_gn_6_80600 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 133561382-133571381 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477089 5263 Asterids View MSA
123740377 5271 Pentapetalae View MSA
122788631 5272 Eudicot View MSA
122045964 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain