Gene : Lsat_1_v5_gn_6_80341 L. sativa V8
Defline:  (1 of 1) PTHR31394//PTHR31394:SF1 - FAMILY NOT NAMED // TRANSMEMBRANE PROTEIN 199 Genomic Order:  2317
Name:  ? Lsat_1_v5_gn_6_80341 Secondary Identifier:  ? PAC:38938678
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_80341 0.5kb upstream 0.5kb upstream 1838   true Lsat_1_v8_lg_6: 131999116-132000953 Lactuca sativa
Lsat_1_v5_gn_6_80341 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 131999116-131999615 Lactuca sativa
Lsat_1_v5_gn_6_80341 0.5kb downstream 0.5kb downstream 1838   true Lsat_1_v8_lg_6: 131999616-132001453 Lactuca sativa
Lsat_1_v5_gn_6_80341 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 132000954-132001453 Lactuca sativa
Lsat_1_v5_gn_6_80341 1.0kb upstream 1.0kb upstream 2338   true Lsat_1_v8_lg_6: 131998616-132000953 Lactuca sativa
Lsat_1_v5_gn_6_80341 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 131998616-131999615 Lactuca sativa
Lsat_1_v5_gn_6_80341 1.0kb downstream 1.0kb downstream 2338   true Lsat_1_v8_lg_6: 131999616-132001953 Lactuca sativa
Lsat_1_v5_gn_6_80341 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 132000954-132001953 Lactuca sativa
Lsat_1_v5_gn_6_80341 2.0kb upstream 2.0kb upstream 3338   true Lsat_1_v8_lg_6: 131997616-132000953 Lactuca sativa
Lsat_1_v5_gn_6_80341 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 131997616-131999615 Lactuca sativa
Lsat_1_v5_gn_6_80341 2.0kb downstream 2.0kb downstream 3338   true Lsat_1_v8_lg_6: 131999616-132002953 Lactuca sativa
Lsat_1_v5_gn_6_80341 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 132000954-132002953 Lactuca sativa
Lsat_1_v5_gn_6_80341 5.0kb upstream 5.0kb upstream 6338   true Lsat_1_v8_lg_6: 131994616-132000953 Lactuca sativa
Lsat_1_v5_gn_6_80341 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 131994616-131999615 Lactuca sativa
Lsat_1_v5_gn_6_80341 5.0kb downstream 5.0kb downstream 6338   true Lsat_1_v8_lg_6: 131999616-132005953 Lactuca sativa
Lsat_1_v5_gn_6_80341 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 132000954-132005953 Lactuca sativa
Lsat_1_v5_gn_6_80341 10.0kb upstream 10.0kb upstream 11338   true Lsat_1_v8_lg_6: 131989616-132000953 Lactuca sativa
Lsat_1_v5_gn_6_80341 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 131989616-131999615 Lactuca sativa
Lsat_1_v5_gn_6_80341 10.0kb downstream 10.0kb downstream 11338   true Lsat_1_v8_lg_6: 131999616-132010953 Lactuca sativa
Lsat_1_v5_gn_6_80341 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 132000954-132010953 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478533 5263 Asterids View MSA
123736376 5271 Pentapetalae View MSA
122786410 5272 Eudicot View MSA
122047904 5273 Angiosperm View MSA
121346393 5274 Embryophyte View MSA
123426086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain