Gene : Lsat_1_v5_gn_6_8180 L. sativa V8
Defline:  (1 of 3) PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Genomic Order:  249
Name:  ? Lsat_1_v5_gn_6_8180 Secondary Identifier:  ? PAC:38941120
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_8180 0.5kb upstream 0.5kb upstream 3307   true Lsat_1_v8_lg_6: 12254302-12257608 Lactuca sativa
Lsat_1_v5_gn_6_8180 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 12254302-12254801 Lactuca sativa
Lsat_1_v5_gn_6_8180 0.5kb downstream 0.5kb downstream 3307   true Lsat_1_v8_lg_6: 12254802-12258108 Lactuca sativa
Lsat_1_v5_gn_6_8180 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 12257609-12258108 Lactuca sativa
Lsat_1_v5_gn_6_8180 1.0kb upstream 1.0kb upstream 3807   true Lsat_1_v8_lg_6: 12253802-12257608 Lactuca sativa
Lsat_1_v5_gn_6_8180 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 12253802-12254801 Lactuca sativa
Lsat_1_v5_gn_6_8180 1.0kb downstream 1.0kb downstream 3807   true Lsat_1_v8_lg_6: 12254802-12258608 Lactuca sativa
Lsat_1_v5_gn_6_8180 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 12257609-12258608 Lactuca sativa
Lsat_1_v5_gn_6_8180 2.0kb upstream 2.0kb upstream 4807   true Lsat_1_v8_lg_6: 12252802-12257608 Lactuca sativa
Lsat_1_v5_gn_6_8180 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 12252802-12254801 Lactuca sativa
Lsat_1_v5_gn_6_8180 2.0kb downstream 2.0kb downstream 4807   true Lsat_1_v8_lg_6: 12254802-12259608 Lactuca sativa
Lsat_1_v5_gn_6_8180 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 12257609-12259608 Lactuca sativa
Lsat_1_v5_gn_6_8180 5.0kb upstream 5.0kb upstream 7807   true Lsat_1_v8_lg_6: 12249802-12257608 Lactuca sativa
Lsat_1_v5_gn_6_8180 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 12249802-12254801 Lactuca sativa
Lsat_1_v5_gn_6_8180 5.0kb downstream 5.0kb downstream 7807   true Lsat_1_v8_lg_6: 12254802-12262608 Lactuca sativa
Lsat_1_v5_gn_6_8180 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 12257609-12262608 Lactuca sativa
Lsat_1_v5_gn_6_8180 10.0kb upstream 10.0kb upstream 12807   true Lsat_1_v8_lg_6: 12244802-12257608 Lactuca sativa
Lsat_1_v5_gn_6_8180 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 12244802-12254801 Lactuca sativa
Lsat_1_v5_gn_6_8180 10.0kb downstream 10.0kb downstream 12807   true Lsat_1_v8_lg_6: 12254802-12267608 Lactuca sativa
Lsat_1_v5_gn_6_8180 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 12257609-12267608 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480496 5263 Asterids View MSA
123741079 5271 Pentapetalae View MSA
122790680 5272 Eudicot View MSA
122043689 5273 Angiosperm View MSA
121345999 5274 Embryophyte View MSA
123428179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain