Gene : Lsat_1_v5_gn_6_8340 L. sativa V8
Defline:  (1 of 2) K14270 - aminotransferase (ACS10_12) Genomic Order:  254
Name:  ? Lsat_1_v5_gn_6_8340 Secondary Identifier:  ? PAC:38937351
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ETHYL-PWY Lactuca sativa pathologic  
Lsativa PWY-7270 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_8340 0.5kb upstream 0.5kb upstream 2843   true Lsat_1_v8_lg_6: 12370993-12373835 Lactuca sativa
Lsat_1_v5_gn_6_8340 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 12370993-12371492 Lactuca sativa
Lsat_1_v5_gn_6_8340 0.5kb downstream 0.5kb downstream 2843   true Lsat_1_v8_lg_6: 12371493-12374335 Lactuca sativa
Lsat_1_v5_gn_6_8340 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 12373836-12374335 Lactuca sativa
Lsat_1_v5_gn_6_8340 1.0kb upstream 1.0kb upstream 3343   true Lsat_1_v8_lg_6: 12370493-12373835 Lactuca sativa
Lsat_1_v5_gn_6_8340 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 12370493-12371492 Lactuca sativa
Lsat_1_v5_gn_6_8340 1.0kb downstream 1.0kb downstream 3343   true Lsat_1_v8_lg_6: 12371493-12374835 Lactuca sativa
Lsat_1_v5_gn_6_8340 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 12373836-12374835 Lactuca sativa
Lsat_1_v5_gn_6_8340 2.0kb upstream 2.0kb upstream 4343   true Lsat_1_v8_lg_6: 12369493-12373835 Lactuca sativa
Lsat_1_v5_gn_6_8340 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 12369493-12371492 Lactuca sativa
Lsat_1_v5_gn_6_8340 2.0kb downstream 2.0kb downstream 4343   true Lsat_1_v8_lg_6: 12371493-12375835 Lactuca sativa
Lsat_1_v5_gn_6_8340 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 12373836-12375835 Lactuca sativa
Lsat_1_v5_gn_6_8340 5.0kb upstream 5.0kb upstream 7343   true Lsat_1_v8_lg_6: 12366493-12373835 Lactuca sativa
Lsat_1_v5_gn_6_8340 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 12366493-12371492 Lactuca sativa
Lsat_1_v5_gn_6_8340 5.0kb downstream 5.0kb downstream 7343   true Lsat_1_v8_lg_6: 12371493-12378835 Lactuca sativa
Lsat_1_v5_gn_6_8340 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 12373836-12378835 Lactuca sativa
Lsat_1_v5_gn_6_8340 10.0kb upstream 10.0kb upstream 12343   true Lsat_1_v8_lg_6: 12361493-12373835 Lactuca sativa
Lsat_1_v5_gn_6_8340 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 12361493-12371492 Lactuca sativa
Lsat_1_v5_gn_6_8340 10.0kb downstream 10.0kb downstream 12343   true Lsat_1_v8_lg_6: 12371493-12383835 Lactuca sativa
Lsat_1_v5_gn_6_8340 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 12373836-12383835 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473979 5263 Asterids View MSA
123749397 5271 Pentapetalae View MSA
122792167 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain