Gene : Lsat_1_v5_gn_6_83620 L. sativa V8
Defline:  (1 of 1) PTHR21320//PTHR21320:SF0 - CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED // METHYLTRANSFERASE-LIKE PROTEIN 17, MITOCHONDRIAL Genomic Order:  2409
Name:  ? Lsat_1_v5_gn_6_83620 Secondary Identifier:  ? PAC:38940309
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_83620 0.5kb upstream 0.5kb upstream 4475   true Lsat_1_v8_lg_6: 137904263-137908737 Lactuca sativa
Lsat_1_v5_gn_6_83620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 137908238-137908737 Lactuca sativa
Lsat_1_v5_gn_6_83620 0.5kb downstream 0.5kb downstream 4475   true Lsat_1_v8_lg_6: 137903763-137908237 Lactuca sativa
Lsat_1_v5_gn_6_83620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 137903763-137904262 Lactuca sativa
Lsat_1_v5_gn_6_83620 1.0kb upstream 1.0kb upstream 4975   true Lsat_1_v8_lg_6: 137904263-137909237 Lactuca sativa
Lsat_1_v5_gn_6_83620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 137908238-137909237 Lactuca sativa
Lsat_1_v5_gn_6_83620 1.0kb downstream 1.0kb downstream 4975   true Lsat_1_v8_lg_6: 137903263-137908237 Lactuca sativa
Lsat_1_v5_gn_6_83620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 137903263-137904262 Lactuca sativa
Lsat_1_v5_gn_6_83620 2.0kb upstream 2.0kb upstream 5975   true Lsat_1_v8_lg_6: 137904263-137910237 Lactuca sativa
Lsat_1_v5_gn_6_83620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 137908238-137910237 Lactuca sativa
Lsat_1_v5_gn_6_83620 2.0kb downstream 2.0kb downstream 5975   true Lsat_1_v8_lg_6: 137902263-137908237 Lactuca sativa
Lsat_1_v5_gn_6_83620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 137902263-137904262 Lactuca sativa
Lsat_1_v5_gn_6_83620 5.0kb upstream 5.0kb upstream 8975   true Lsat_1_v8_lg_6: 137904263-137913237 Lactuca sativa
Lsat_1_v5_gn_6_83620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 137908238-137913237 Lactuca sativa
Lsat_1_v5_gn_6_83620 5.0kb downstream 5.0kb downstream 8975   true Lsat_1_v8_lg_6: 137899263-137908237 Lactuca sativa
Lsat_1_v5_gn_6_83620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 137899263-137904262 Lactuca sativa
Lsat_1_v5_gn_6_83620 10.0kb upstream 10.0kb upstream 13975   true Lsat_1_v8_lg_6: 137904263-137918237 Lactuca sativa
Lsat_1_v5_gn_6_83620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 137908238-137918237 Lactuca sativa
Lsat_1_v5_gn_6_83620 10.0kb downstream 10.0kb downstream 13975   true Lsat_1_v8_lg_6: 137894263-137908237 Lactuca sativa
Lsat_1_v5_gn_6_83620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 137894263-137904262 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470661 5263 Asterids View MSA
123738649 5271 Pentapetalae View MSA
122785765 5272 Eudicot View MSA
122046431 5273 Angiosperm View MSA
121344700 5274 Embryophyte View MSA
123426720 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain