Gene : Lsat_1_v5_gn_6_84640 L. sativa V8
Defline:  (1 of 2) PTHR21495//PTHR21495:SF40 - NUCLEOPORIN-RELATED // DIRIGENT PROTEIN 12-RELATED Genomic Order:  2471
Name:  ? Lsat_1_v5_gn_6_84640 Secondary Identifier:  ? PAC:38940268
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_84640 0.5kb upstream 0.5kb upstream 1381   true Lsat_1_v8_lg_6: 141985447-141986827 Lactuca sativa
Lsat_1_v5_gn_6_84640 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 141985447-141985946 Lactuca sativa
Lsat_1_v5_gn_6_84640 0.5kb downstream 0.5kb downstream 1381   true Lsat_1_v8_lg_6: 141985947-141987327 Lactuca sativa
Lsat_1_v5_gn_6_84640 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 141986828-141987327 Lactuca sativa
Lsat_1_v5_gn_6_84640 1.0kb upstream 1.0kb upstream 1881   true Lsat_1_v8_lg_6: 141984947-141986827 Lactuca sativa
Lsat_1_v5_gn_6_84640 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 141984947-141985946 Lactuca sativa
Lsat_1_v5_gn_6_84640 1.0kb downstream 1.0kb downstream 1881   true Lsat_1_v8_lg_6: 141985947-141987827 Lactuca sativa
Lsat_1_v5_gn_6_84640 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 141986828-141987827 Lactuca sativa
Lsat_1_v5_gn_6_84640 2.0kb upstream 2.0kb upstream 2881   true Lsat_1_v8_lg_6: 141983947-141986827 Lactuca sativa
Lsat_1_v5_gn_6_84640 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 141983947-141985946 Lactuca sativa
Lsat_1_v5_gn_6_84640 2.0kb downstream 2.0kb downstream 2881   true Lsat_1_v8_lg_6: 141985947-141988827 Lactuca sativa
Lsat_1_v5_gn_6_84640 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 141986828-141988827 Lactuca sativa
Lsat_1_v5_gn_6_84640 5.0kb upstream 5.0kb upstream 5881   true Lsat_1_v8_lg_6: 141980947-141986827 Lactuca sativa
Lsat_1_v5_gn_6_84640 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 141980947-141985946 Lactuca sativa
Lsat_1_v5_gn_6_84640 5.0kb downstream 5.0kb downstream 5881   true Lsat_1_v8_lg_6: 141985947-141991827 Lactuca sativa
Lsat_1_v5_gn_6_84640 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 141986828-141991827 Lactuca sativa
Lsat_1_v5_gn_6_84640 10.0kb upstream 10.0kb upstream 10881   true Lsat_1_v8_lg_6: 141975947-141986827 Lactuca sativa
Lsat_1_v5_gn_6_84640 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 141975947-141985946 Lactuca sativa
Lsat_1_v5_gn_6_84640 10.0kb downstream 10.0kb downstream 10881   true Lsat_1_v8_lg_6: 141985947-141996827 Lactuca sativa
Lsat_1_v5_gn_6_84640 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 141986828-141996827 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121446725 5263 Asterids Singleton cluster - no MSA
123748971 5271 Pentapetalae View MSA
122793994 5272 Eudicot View MSA
122050560 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain