Gene : Lsat_1_v5_gn_7_17321 L. sativa V8
Defline:  (1 of 1) PTHR15921:SF4 - PCF11P-SIMILAR PROTEIN 4 Genomic Order:  568
Name:  ? Lsat_1_v5_gn_7_17321 Secondary Identifier:  ? PAC:38912053
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_17321 0.5kb upstream 0.5kb upstream 5315   true Lsat_1_v8_lg_7: 21202772-21208086 Lactuca sativa
Lsat_1_v5_gn_7_17321 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 21202772-21203271 Lactuca sativa
Lsat_1_v5_gn_7_17321 0.5kb downstream 0.5kb downstream 5315   true Lsat_1_v8_lg_7: 21203272-21208586 Lactuca sativa
Lsat_1_v5_gn_7_17321 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 21208087-21208586 Lactuca sativa
Lsat_1_v5_gn_7_17321 1.0kb upstream 1.0kb upstream 5815   true Lsat_1_v8_lg_7: 21202272-21208086 Lactuca sativa
Lsat_1_v5_gn_7_17321 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 21202272-21203271 Lactuca sativa
Lsat_1_v5_gn_7_17321 1.0kb downstream 1.0kb downstream 5815   true Lsat_1_v8_lg_7: 21203272-21209086 Lactuca sativa
Lsat_1_v5_gn_7_17321 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 21208087-21209086 Lactuca sativa
Lsat_1_v5_gn_7_17321 2.0kb upstream 2.0kb upstream 6815   true Lsat_1_v8_lg_7: 21201272-21208086 Lactuca sativa
Lsat_1_v5_gn_7_17321 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 21201272-21203271 Lactuca sativa
Lsat_1_v5_gn_7_17321 2.0kb downstream 2.0kb downstream 6815   true Lsat_1_v8_lg_7: 21203272-21210086 Lactuca sativa
Lsat_1_v5_gn_7_17321 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 21208087-21210086 Lactuca sativa
Lsat_1_v5_gn_7_17321 5.0kb upstream 5.0kb upstream 9815   true Lsat_1_v8_lg_7: 21198272-21208086 Lactuca sativa
Lsat_1_v5_gn_7_17321 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 21198272-21203271 Lactuca sativa
Lsat_1_v5_gn_7_17321 5.0kb downstream 5.0kb downstream 9815   true Lsat_1_v8_lg_7: 21203272-21213086 Lactuca sativa
Lsat_1_v5_gn_7_17321 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 21208087-21213086 Lactuca sativa
Lsat_1_v5_gn_7_17321 10.0kb upstream 10.0kb upstream 14815   true Lsat_1_v8_lg_7: 21193272-21208086 Lactuca sativa
Lsat_1_v5_gn_7_17321 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 21193272-21203271 Lactuca sativa
Lsat_1_v5_gn_7_17321 10.0kb downstream 10.0kb downstream 14815   true Lsat_1_v8_lg_7: 21203272-21218086 Lactuca sativa
Lsat_1_v5_gn_7_17321 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 21208087-21218086 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478501 5263 Asterids View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain