Gene : Lsat_1_v5_gn_7_19480 L. sativa V8
Defline:  (1 of 1) PF08513//PF10607 - LisH (LisH) // CTLH/CRA C-terminal to LisH motif domain (CLTH) Genomic Order:  672
Name:  ? Lsat_1_v5_gn_7_19480 Secondary Identifier:  ? PAC:38911096
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_19480 0.5kb upstream 0.5kb upstream 3499   true Lsat_1_v8_lg_7: 26301264-26304762 Lactuca sativa
Lsat_1_v5_gn_7_19480 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 26304263-26304762 Lactuca sativa
Lsat_1_v5_gn_7_19480 0.5kb downstream 0.5kb downstream 3499   true Lsat_1_v8_lg_7: 26300764-26304262 Lactuca sativa
Lsat_1_v5_gn_7_19480 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 26300764-26301263 Lactuca sativa
Lsat_1_v5_gn_7_19480 1.0kb upstream 1.0kb upstream 3999   true Lsat_1_v8_lg_7: 26301264-26305262 Lactuca sativa
Lsat_1_v5_gn_7_19480 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 26304263-26305262 Lactuca sativa
Lsat_1_v5_gn_7_19480 1.0kb downstream 1.0kb downstream 3999   true Lsat_1_v8_lg_7: 26300264-26304262 Lactuca sativa
Lsat_1_v5_gn_7_19480 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 26300264-26301263 Lactuca sativa
Lsat_1_v5_gn_7_19480 2.0kb upstream 2.0kb upstream 4999   true Lsat_1_v8_lg_7: 26301264-26306262 Lactuca sativa
Lsat_1_v5_gn_7_19480 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 26304263-26306262 Lactuca sativa
Lsat_1_v5_gn_7_19480 2.0kb downstream 2.0kb downstream 4999   true Lsat_1_v8_lg_7: 26299264-26304262 Lactuca sativa
Lsat_1_v5_gn_7_19480 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 26299264-26301263 Lactuca sativa
Lsat_1_v5_gn_7_19480 5.0kb upstream 5.0kb upstream 7999   true Lsat_1_v8_lg_7: 26301264-26309262 Lactuca sativa
Lsat_1_v5_gn_7_19480 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 26304263-26309262 Lactuca sativa
Lsat_1_v5_gn_7_19480 5.0kb downstream 5.0kb downstream 7999   true Lsat_1_v8_lg_7: 26296264-26304262 Lactuca sativa
Lsat_1_v5_gn_7_19480 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 26296264-26301263 Lactuca sativa
Lsat_1_v5_gn_7_19480 10.0kb upstream 10.0kb upstream 12999   true Lsat_1_v8_lg_7: 26301264-26314262 Lactuca sativa
Lsat_1_v5_gn_7_19480 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 26304263-26314262 Lactuca sativa
Lsat_1_v5_gn_7_19480 10.0kb downstream 10.0kb downstream 12999   true Lsat_1_v8_lg_7: 26291264-26304262 Lactuca sativa
Lsat_1_v5_gn_7_19480 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 26291264-26301263 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473338 5263 Asterids View MSA
123749928 5271 Pentapetalae View MSA
122788874 5272 Eudicot View MSA
122047349 5273 Angiosperm View MSA
121347103 5274 Embryophyte View MSA
123424554 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain