Gene : Lsat_1_v5_gn_7_2120 L. sativa V8
Defline:  (1 of 2) K14506 - jasmonic acid-amino synthetase (JAR1) Genomic Order:  64
Name:  ? Lsat_1_v5_gn_7_2120 Secondary Identifier:  ? PAC:38912220
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_2120 0.5kb upstream 0.5kb upstream 3719   true Lsat_1_v8_lg_7: 3248715-3252433 Lactuca sativa
Lsat_1_v5_gn_7_2120 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 3248715-3249214 Lactuca sativa
Lsat_1_v5_gn_7_2120 0.5kb downstream 0.5kb downstream 3719   true Lsat_1_v8_lg_7: 3249215-3252933 Lactuca sativa
Lsat_1_v5_gn_7_2120 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 3252434-3252933 Lactuca sativa
Lsat_1_v5_gn_7_2120 1.0kb upstream 1.0kb upstream 4219   true Lsat_1_v8_lg_7: 3248215-3252433 Lactuca sativa
Lsat_1_v5_gn_7_2120 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 3248215-3249214 Lactuca sativa
Lsat_1_v5_gn_7_2120 1.0kb downstream 1.0kb downstream 4219   true Lsat_1_v8_lg_7: 3249215-3253433 Lactuca sativa
Lsat_1_v5_gn_7_2120 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 3252434-3253433 Lactuca sativa
Lsat_1_v5_gn_7_2120 2.0kb upstream 2.0kb upstream 5219   true Lsat_1_v8_lg_7: 3247215-3252433 Lactuca sativa
Lsat_1_v5_gn_7_2120 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 3247215-3249214 Lactuca sativa
Lsat_1_v5_gn_7_2120 2.0kb downstream 2.0kb downstream 5219   true Lsat_1_v8_lg_7: 3249215-3254433 Lactuca sativa
Lsat_1_v5_gn_7_2120 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 3252434-3254433 Lactuca sativa
Lsat_1_v5_gn_7_2120 5.0kb upstream 5.0kb upstream 8219   true Lsat_1_v8_lg_7: 3244215-3252433 Lactuca sativa
Lsat_1_v5_gn_7_2120 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 3244215-3249214 Lactuca sativa
Lsat_1_v5_gn_7_2120 5.0kb downstream 5.0kb downstream 8219   true Lsat_1_v8_lg_7: 3249215-3257433 Lactuca sativa
Lsat_1_v5_gn_7_2120 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 3252434-3257433 Lactuca sativa
Lsat_1_v5_gn_7_2120 10.0kb upstream 10.0kb upstream 13219   true Lsat_1_v8_lg_7: 3239215-3252433 Lactuca sativa
Lsat_1_v5_gn_7_2120 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 3239215-3249214 Lactuca sativa
Lsat_1_v5_gn_7_2120 10.0kb downstream 10.0kb downstream 13219   true Lsat_1_v8_lg_7: 3249215-3262433 Lactuca sativa
Lsat_1_v5_gn_7_2120 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 3252434-3262433 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478029 5263 Asterids View MSA
123741688 5271 Pentapetalae View MSA
122793518 5272 Eudicot View MSA
122043357 5273 Angiosperm View MSA
121349637 5274 Embryophyte View MSA
123381383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain